Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.57□□□□□ -2.32
HMGB4Q8WW32 RNU6-1006P-201ENST00000516998 103 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 RNA5SP47-201ENST00000517230 109 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 AL512310.12-203ENST00000640543 90 ntBASIC0.57□□□□□ -2.32
HMGB4Q8WW32 SNORA36.1-201ENST00000363424 132 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.261-201ENST00000364631 102 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 RNU6-571P-201ENST00000384128 107 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 SNORA8.2-201ENST00000384372 139 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 SNORD38.2-201ENST00000384470 69 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.549-201ENST00000384657 102 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 TRAJ51-201ENST00000504127 63 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 AL670379.3-201ENST00000605040 251 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 AL365222.1-201ENST00000614661 98 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 AC132825.6-201ENST00000638861 357 ntBASIC0.56□□□□□ -2.32
HMGB4Q8WW32 RNU6-1229P-201ENST00000364295 107 ntBASIC0.55□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.309-201ENST00000365046 111 ntBASIC0.55□□□□□ -2.32
HMGB4Q8WW32 MIR6828-201ENST00000636181 60 ntBASIC0.55□□□□□ -2.32
HMGB4Q8WW32 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.30-201ENST00000362572 97 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 SCARNA16.5-201ENST00000517114 183 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 AC244669.1-204ENST00000621564 178 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 MIR924-201ENST00000638017 53 ntBASIC0.54□□□□□ -2.32
HMGB4Q8WW32 RNU6-170P-201ENST00000362832 104 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 RNU6-1117P-201ENST00000384525 104 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 RNU6-850P-201ENST00000516934 103 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
HMGB4Q8WW32 SNORD118-201ENST00000363593 134 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 SNORD38.1-201ENST00000363863 68 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.374-201ENST00000365606 101 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNU6-1201P-201ENST00000384227 107 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNU6-22P-201ENST00000384355 107 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 MIR519A1-201ENST00000385257 85 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 AC097635.1-201ENST00000450678 155 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNA5SP268-201ENST00000516828 124 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 RNA5SP330-201ENST00000517096 96 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 MTND5P40-201ENST00000559945 246 ntBASIC0.52□□□□□ -2.33
HMGB4Q8WW32 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD115-24-201ENST00000363528 82 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.247-201ENST00000364500 92 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.258-201ENST00000364613 105 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD113-1-201ENST00000365321 69 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 RNU6-1168P-201ENST00000390831 104 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD63B-201ENST00000411005 70 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORD71-201ENST00000411292 86 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 RNU6-62P-201ENST00000516526 102 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 AC068339.1-201ENST00000526965 141 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 SNORA25.18-201ENST00000607153 114 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.49-201ENST00000362714 112 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 RNU6-716P-201ENST00000365621 103 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGB4Q8WW32 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 MIR8087-201ENST00000612745 78 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 AL442128.1-201ENST00000615151 90 ntBASIC0.5□□□□□ -2.33
HMGB4Q8WW32 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.5□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.35-201ENST00000362601 101 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNA5SP457-201ENST00000363657 124 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNA5SP205-201ENST00000364653 136 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.281-201ENST00000364774 94 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.342-201ENST00000365352 113 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.377-201ENST00000365644 108 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNU6-880P-201ENST00000384526 107 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR599-201ENST00000385069 95 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR548G-201ENST00000408442 89 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR4694-201ENST00000578534 80 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR5009-201ENST00000578736 100 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 RNU6-90P-201ENST00000606352 106 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 MIR7107-201ENST00000611489 80 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.49□□□□□ -2.33
HMGB4Q8WW32 AC091304.10-201ENST00000641554 121 ntBASIC0.49□□□□□ -2.33
HMGB4Q8WW32 U8.6-201ENST00000364939 135 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 SNORD116-21-201ENST00000384507 92 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 MIR577-201ENST00000385196 96 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 SPINT5P-201ENST00000448174 155 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNU7-195P-201ENST00000458793 62 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNA5SP227-201ENST00000516184 113 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNU6-479P-201ENST00000516348 105 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 RNU7-161P-201ENST00000517289 62 ntBASIC0.48□□□□□ -2.33
HMGB4Q8WW32 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
HMGB4Q8WW32 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
HMGB4Q8WW32 MIRLET7D-201ENST00000362263 87 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 RNA5SP403-201ENST00000363598 108 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.173-201ENST00000363776 113 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 RNU7-106P-201ENST00000459514 67 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 Y_RNA.809-201ENST00000516058 95 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.47□□□□□ -2.33
HMGB4Q8WW32 MIR330-201ENST00000362196 94 ntBASIC0.46□□□□□ -2.34
HMGB4Q8WW32 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.46□□□□□ -2.34
HMGB4Q8WW32 RNU6-1260P-201ENST00000362944 107 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 SNORD44.1-201ENST00000363202 61 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
HMGB4Q8WW32 RNU6-1144P-201ENST00000384247 104 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 211.9 ms