Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 RNU6-535P-201ENST00000384722 107 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 SNORD105-201ENST00000386910 85 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 RNU6-1254P-201ENST00000391266 104 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 RNA5SP458-201ENST00000516188 119 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
HIPK4Q8NE63 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.17□□□□□ -2.22
HIPK4Q8NE63 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
HIPK4Q8NE63 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
HIPK4Q8NE63 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 RNU7-195P-201ENST00000458793 62 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 MIR4421-201ENST00000578133 69 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
HIPK4Q8NE63 SNORA7.1-201ENST00000363750 139 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.558-201ENST00000384685 113 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 RNA5SP255-201ENST00000516370 107 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 uc_338.16-201ENST00000621804 95 ntBASIC1.15□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.32-201ENST00000362589 110 ntBASIC1.14□□□□□ -2.23
HIPK4Q8NE63 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
HIPK4Q8NE63 RNU6-1134P-201ENST00000365156 101 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 RNU6-243P-201ENST00000391140 107 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.593-201ENST00000410292 98 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.609-201ENST00000410669 89 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.648-201ENST00000459455 110 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 SNORA31.14-201ENST00000516728 116 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 AC138907.6-201ENST00000568401 126 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 AC138869.1-201ENST00000568623 124 ntBASIC1.13□□□□□ -2.23
HIPK4Q8NE63 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.13□□□□□ -2.23
HIPK4Q8NE63 RNU6-1260P-201ENST00000362944 107 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 AP1B1P2-201ENST00000416196 106 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 AC097635.1-201ENST00000450678 155 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 snoU13.11-201ENST00000459219 104 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 AC002350.1-201ENST00000490759 375 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 RNU6-237P-201ENST00000515985 71 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.809-201ENST00000516058 95 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 RNU6-762P-201ENST00000517107 102 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.12□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.17-201ENST00000362433 111 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 SNORD73B-201ENST00000364394 72 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 AC244505.6-201ENST00000452829 130 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 RNU7-85P-201ENST00000458851 63 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 AC025627.3-201ENST00000582078 182 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
HIPK4Q8NE63 RNU6-219P-201ENST00000364728 107 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 SNORD116-22-201ENST00000384430 92 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 MIR573-201ENST00000384964 99 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 MIR599-201ENST00000385069 95 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 RNU6-402P-201ENST00000410678 103 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 MIR4668-201ENST00000582284 70 ntBASIC1.1□□□□□ -2.23
HIPK4Q8NE63 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.1□□□□□ -2.23
HIPK4Q8NE63 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HIPK4Q8NE63 Y_RNA.174-201ENST00000363781 105 ntBASIC1.09□□□□□ -2.23
HIPK4Q8NE63 RNU6-675P-201ENST00000384236 104 ntBASIC1.09□□□□□ -2.23
HIPK4Q8NE63 SNORD4B-201ENST00000459083 72 ntBASIC1.09□□□□□ -2.23
HIPK4Q8NE63 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
HIPK4Q8NE63 RNU6-957P-201ENST00000363652 99 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.283-201ENST00000364798 112 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNY1P4-201ENST00000384595 115 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNU6-519P-201ENST00000410590 108 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.620-201ENST00000411009 88 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 AL161932.1-201ENST00000437408 146 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNU6-267P-201ENST00000516714 103 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 MIR3124-201ENST00000582636 67 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
HIPK4Q8NE63 RNY1P10-201ENST00000363268 113 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 AL606490.4-201ENST00000423117 127 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 RNU6-75P-201ENST00000515944 104 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.07□□□□□ -2.24
HIPK4Q8NE63 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.07□□□□□ -2.24
HIPK4Q8NE63 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.07□□□□□ -2.24
HIPK4Q8NE63 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.07□□□□□ -2.24
HIPK4Q8NE63 RNU6-497P-201ENST00000365316 104 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 RNU6-524P-201ENST00000384270 107 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 RNU6-466P-201ENST00000391224 103 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 SNORD99-201ENST00000408612 74 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 MIR3612-201ENST00000579753 87 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 AC062037.1-201ENST00000605302 128 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 snoU13.31-201ENST00000607291 104 ntBASIC1.06□□□□□ -2.24
HIPK4Q8NE63 RNA5SP117-201ENST00000365294 118 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HIPK4Q8NE63 MIR450A2-201ENST00000385022 100 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 MIR644A-201ENST00000385262 94 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 RNU6-1265P-201ENST00000516342 103 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 TRDV1-202ENST00000621643 102 ntBASIC1.05□□□□□ -2.24
HIPK4Q8NE63 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.04□□□□□ -2.24
HIPK4Q8NE63 MIR494-201ENST00000349529 81 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 RNU6-633P-201ENST00000362612 103 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.221-201ENST00000364248 96 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 SNORD115-27-201ENST00000364430 82 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 MIR1302-4-201ENST00000408701 150 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 AC011195.1-201ENST00000578177 177 ntBASIC1.03□□□□□ -2.24
HIPK4Q8NE63 Y_RNA.4-201ENST00000362333 112 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 Y_RNA.191-201ENST00000363972 113 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 Y_RNA.327-201ENST00000365201 102 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 RNY4P29-201ENST00000410801 97 ntBASIC1.02□□□□□ -2.25
HIPK4Q8NE63 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 263.5 ms