Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MIR4491-201ENST00000581087 68 ntBASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
SIMC1Q8NDZ2 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
SIMC1Q8NDZ2 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
SIMC1Q8NDZ2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SIMC1Q8NDZ2 AC087499.7-201ENST00000441958 109 ntBASIC1.34□□□□□ -2.19
SIMC1Q8NDZ2 MIR18B-201ENST00000454574 71 ntBASIC1.34□□□□□ -2.19
SIMC1Q8NDZ2 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
SIMC1Q8NDZ2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.34□□□□□ -2.19
SIMC1Q8NDZ2 Y_RNA.588-201ENST00000391254 102 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 SNORD93-201ENST00000408813 74 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-519P-201ENST00000410590 108 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 snoU13.21-201ENST00000459368 105 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 AC048334.1-201ENST00000477975 159 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-531P-201ENST00000516694 104 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 SNORA25.16-201ENST00000516741 121 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.33□□□□□ -2.2
SIMC1Q8NDZ2 RNU1-36P-201ENST00000365130 165 ntBASIC1.32□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-524P-201ENST00000384270 107 ntBASIC1.32□□□□□ -2.2
SIMC1Q8NDZ2 SNORA80D-201ENST00000384488 135 ntBASIC1.32□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-910P-201ENST00000390844 107 ntBASIC1.32□□□□□ -2.2
SIMC1Q8NDZ2 MIR6078-201ENST00000611069 100 ntBASIC1.32□□□□□ -2.2
SIMC1Q8NDZ2 SNORD114-26-201ENST00000363543 72 ntBASIC1.31□□□□□ -2.2
SIMC1Q8NDZ2 MIR519C-201ENST00000385053 87 ntBASIC1.31□□□□□ -2.2
SIMC1Q8NDZ2 Y_RNA.607-201ENST00000410597 98 ntBASIC1.31□□□□□ -2.2
SIMC1Q8NDZ2 AL591704.2-201ENST00000421658 181 ntBASIC1.31□□□□□ -2.2
SIMC1Q8NDZ2 SNORD4B-201ENST00000459083 72 ntBASIC1.31□□□□□ -2.2
SIMC1Q8NDZ2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.31□□□□□ -2.2
SIMC1Q8NDZ2 AL353770.2-201ENST00000620024 78 ntBASIC1.31□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-403P-201ENST00000363163 104 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 RNU4-58P-201ENST00000363192 141 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-652P-201ENST00000365488 107 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 MIR516A2-201ENST00000384888 90 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 MIR516A1-201ENST00000385033 90 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-279P-201ENST00000391297 101 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 RNU7-85P-201ENST00000458851 63 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 RNU7-185P-201ENST00000459215 60 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 AC023934.1-201ENST00000574529 2389 ntBASIC1.3□□□□□ -2.2
SIMC1Q8NDZ2 SNORD36A-201ENST00000362874 73 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 SNORD113.3-201ENST00000364630 78 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 SNORA72.6-201ENST00000384520 129 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 SNORA75.2-201ENST00000391138 150 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 SNORA75.3-201ENST00000391231 150 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 AC093729.1-201ENST00000513074 128 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 AC036111.3-201ENST00000526389 112 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
SIMC1Q8NDZ2 RNU6-53P-201ENST00000365367 106 ntBASIC1.28□□□□□ -2.2
SIMC1Q8NDZ2 SNORD114-22-201ENST00000365423 72 ntBASIC1.28□□□□□ -2.2
SIMC1Q8NDZ2 snoU13.11-201ENST00000459219 104 ntBASIC1.28□□□□□ -2.2
SIMC1Q8NDZ2 Y_RNA.648-201ENST00000459455 110 ntBASIC1.28□□□□□ -2.2
SIMC1Q8NDZ2 RNU7-106P-201ENST00000459514 67 ntBASIC1.28□□□□□ -2.2
SIMC1Q8NDZ2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 RNU4-32P-201ENST00000363404 141 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 Y_RNA.244-201ENST00000364484 109 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 Y_RNA.316-201ENST00000365118 111 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 RNU6-934P-201ENST00000365154 107 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 AC015818.7-201ENST00000428754 109 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 RNU6-857P-201ENST00000515893 110 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 SNORD79.1-201ENST00000516069 84 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 RNU7-153P-201ENST00000516455 62 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 AC013244.2-201ENST00000603396 103 ntBASIC1.27□□□□□ -2.21
SIMC1Q8NDZ2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 SNORD115-37-201ENST00000363768 82 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 RNU6-243P-201ENST00000391140 107 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 MIR1236-201ENST00000408340 102 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 MIR1257-201ENST00000408490 117 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 SNORD63B-201ENST00000411005 70 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 RNU7-90P-201ENST00000459216 62 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 AC140658.3-201ENST00000567603 271 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 MIR6515-201ENST00000619843 57 ntBASIC1.26□□□□□ -2.21
SIMC1Q8NDZ2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 RNU1-124P-201ENST00000363861 145 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 SNORD100-201ENST00000408573 76 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 RNU6-1194P-201ENST00000516208 104 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 MIR6082-201ENST00000613604 109 ntBASIC1.25□□□□□ -2.21
SIMC1Q8NDZ2 MIR101-2-201ENST00000362195 79 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 MIR19B1-201ENST00000384829 87 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 MIR125B2-201ENST00000385128 89 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 SNORD111-201ENST00000408139 94 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 TRAJ51-201ENST00000504127 63 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 MIR4771-2-201ENST00000577758 74 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 MIR4771-1-201ENST00000582617 74 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 MIR4536-1-201ENST00000583537 88 ntBASIC1.24□□□□□ -2.21
SIMC1Q8NDZ2 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 197.9 ms