Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU6-865P-201ENST00000364772 107 ntBASIC0.68□□□□□ -2.3
HERC6Q8IVU3 U8.6-201ENST00000364939 135 ntBASIC0.68□□□□□ -2.3
HERC6Q8IVU3 RNU6-409P-201ENST00000384114 104 ntBASIC0.68□□□□□ -2.3
HERC6Q8IVU3 RNU6-733P-201ENST00000410759 104 ntBASIC0.68□□□□□ -2.3
HERC6Q8IVU3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.68□□□□□ -2.3
HERC6Q8IVU3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.68□□□□□ -2.3
HERC6Q8IVU3 MIR18A-201ENST00000362310 71 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 RNU6-834P-201ENST00000362367 110 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 RNU6-1313P-201ENST00000362622 102 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 RNA5SP499-201ENST00000363982 119 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 Y_RNA.507-201ENST00000384500 99 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 Y_RNA.536-201ENST00000384621 113 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 RNU6-291P-201ENST00000384720 107 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 MIR1912-201ENST00000410389 80 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 RNU6-1194P-201ENST00000516208 104 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 RNU6-1018P-201ENST00000516577 106 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 SNORA31.14-201ENST00000516728 116 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 AP003327.1-201ENST00000529684 127 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 MIR5009-201ENST00000578736 100 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 uc_338.16-201ENST00000621804 95 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 AL512310.12-203ENST00000640543 90 ntBASIC0.67□□□□□ -2.3
HERC6Q8IVU3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
HERC6Q8IVU3 Y_RNA.291-201ENST00000364886 113 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 Y_RNA.309-201ENST00000365046 111 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 RNU6-1056P-201ENST00000383996 107 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 RNU6-880P-201ENST00000384526 107 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 RNU6-1081P-201ENST00000384537 107 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 MIR577-201ENST00000385196 96 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 MIR140-201ENST00000385282 100 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 BX276092.1-201ENST00000427368 251 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 Y_RNA.697-201ENST00000516776 113 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 MIR3613-201ENST00000579844 87 ntBASIC0.66□□□□□ -2.3
HERC6Q8IVU3 Y_RNA.32-201ENST00000362589 110 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.273-201ENST00000364703 102 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.323-201ENST00000365157 109 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 RNY1P8-201ENST00000383970 114 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 RNU6-1201P-201ENST00000384227 107 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 RNU6-535P-201ENST00000384722 107 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 MIR1197-201ENST00000408818 88 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 RNU6-469P-201ENST00000516253 101 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 RNU6-589P-201ENST00000516485 107 ntBASIC0.65□□□□□ -2.31
HERC6Q8IVU3 RNU6-1107P-201ENST00000364817 104 ntBASIC0.64□□□□□ -2.31
HERC6Q8IVU3 RNU6-1014P-201ENST00000383940 103 ntBASIC0.64□□□□□ -2.31
HERC6Q8IVU3 MIR644A-201ENST00000385262 94 ntBASIC0.64□□□□□ -2.31
HERC6Q8IVU3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.64□□□□□ -2.31
HERC6Q8IVU3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.64□□□□□ -2.31
HERC6Q8IVU3 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
HERC6Q8IVU3 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
HERC6Q8IVU3 AL442128.1-201ENST00000615151 90 ntBASIC0.64□□□□□ -2.31
HERC6Q8IVU3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.64□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.56-201ENST00000362798 112 ntBASIC0.63□□□□□ -2.31
HERC6Q8IVU3 RNU6-1099P-201ENST00000363533 107 ntBASIC0.63□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.629-201ENST00000411368 105 ntBASIC0.63□□□□□ -2.31
HERC6Q8IVU3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.63□□□□□ -2.31
HERC6Q8IVU3 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
HERC6Q8IVU3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.63□□□□□ -2.31
HERC6Q8IVU3 MIR101-2-201ENST00000362195 79 ntBASIC0.62□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.49-201ENST00000362714 112 ntBASIC0.62□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.174-201ENST00000363781 105 ntBASIC0.62□□□□□ -2.31
HERC6Q8IVU3 RNU6-1325P-201ENST00000364905 105 ntBASIC0.62□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.62□□□□□ -2.31
HERC6Q8IVU3 TRAJ51-201ENST00000504127 63 ntBASIC0.62□□□□□ -2.31
HERC6Q8IVU3 MIR3678-201ENST00000578455 94 ntBASIC0.62□□□□□ -2.31
HERC6Q8IVU3 RNU6-832P-201ENST00000363319 107 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 SNORD20-201ENST00000384550 80 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 RNY4P18-201ENST00000391107 89 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 SNRPGP12-201ENST00000449481 213 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 RN7SKP12-201ENST00000516275 143 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 RNU6-412P-201ENST00000516434 106 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.709-201ENST00000516952 92 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 MIR4694-201ENST00000578534 80 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 MIR548AI-201ENST00000579940 88 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.61□□□□□ -2.31
HERC6Q8IVU3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HERC6Q8IVU3 RNY3P2-201ENST00000362918 102 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 SNORD38.1-201ENST00000363863 68 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.377-201ENST00000365644 108 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 MIR548G-201ENST00000408442 89 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 SNORA19.1-201ENST00000410656 129 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 RNU7-106P-201ENST00000459514 67 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 RNU6-135P-201ENST00000516769 101 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 RNU6-850P-201ENST00000516934 103 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 AC092634.7-201ENST00000621022 103 ntBASIC0.6□□□□□ -2.31
HERC6Q8IVU3 Y_RNA.173-201ENST00000363776 113 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 RNU6-1163P-201ENST00000364516 107 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 RNU6-106P-201ENST00000384405 107 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 MIR635-201ENST00000384830 98 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 SPINT5P-201ENST00000448174 155 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 MTND5P40-201ENST00000559945 246 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 MIR548H5-201ENST00000580314 60 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 RNU6-90P-201ENST00000606352 106 ntBASIC0.59□□□□□ -2.31
HERC6Q8IVU3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HERC6Q8IVU3 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
HERC6Q8IVU3 SNORD18A-201ENST00000363753 72 ntBASIC0.58□□□□□ -2.32
HERC6Q8IVU3 RNU6-215P-201ENST00000365169 102 ntBASIC0.58□□□□□ -2.32
HERC6Q8IVU3 RNU6-571P-201ENST00000384128 107 ntBASIC0.58□□□□□ -2.32
HERC6Q8IVU3 SNORD38.2-201ENST00000384470 69 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 244 ms