Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.24□□□□□ -2.05
RNF135Q8IUD6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.24□□□□□ -2.05
RNF135Q8IUD6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.24□□□□□ -2.05
RNF135Q8IUD6 Y_RNA.42-201ENST00000362660 108 ntBASIC2.23□□□□□ -2.05
RNF135Q8IUD6 Y_RNA.207-201ENST00000364142 106 ntBASIC2.23□□□□□ -2.05
RNF135Q8IUD6 RNU7-195P-201ENST00000458793 62 ntBASIC2.23□□□□□ -2.05
RNF135Q8IUD6 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
RNF135Q8IUD6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
RNF135Q8IUD6 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
RNF135Q8IUD6 MIR3198-2-201ENST00000577868 80 ntBASIC2.23□□□□□ -2.05
RNF135Q8IUD6 RNU6-340P-201ENST00000364005 107 ntBASIC2.22□□□□□ -2.05
RNF135Q8IUD6 Y_RNA.371-201ENST00000365591 113 ntBASIC2.22□□□□□ -2.05
RNF135Q8IUD6 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
RNF135Q8IUD6 SNORD100-201ENST00000408573 76 ntBASIC2.22□□□□□ -2.05
RNF135Q8IUD6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.22□□□□□ -2.05
RNF135Q8IUD6 TRAJ51-201ENST00000504127 63 ntBASIC2.22□□□□□ -2.05
RNF135Q8IUD6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.22□□□□□ -2.05
RNF135Q8IUD6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RNF135Q8IUD6 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RNF135Q8IUD6 RNU1-36P-201ENST00000365130 165 ntBASIC2.21□□□□□ -2.06
RNF135Q8IUD6 RNU6-291P-201ENST00000384720 107 ntBASIC2.21□□□□□ -2.06
RNF135Q8IUD6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.21□□□□□ -2.06
RNF135Q8IUD6 AL606490.4-201ENST00000423117 127 ntBASIC2.21□□□□□ -2.06
RNF135Q8IUD6 TRDV1-202ENST00000621643 102 ntBASIC2.21□□□□□ -2.06
RNF135Q8IUD6 Y_RNA.239-201ENST00000364444 113 ntBASIC2.2□□□□□ -2.06
RNF135Q8IUD6 Y_RNA.536-201ENST00000384621 113 ntBASIC2.2□□□□□ -2.06
RNF135Q8IUD6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
RNF135Q8IUD6 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.2□□□□□ -2.06
RNF135Q8IUD6 AC104435.1-201ENST00000483483 166 ntBASIC2.2□□□□□ -2.06
RNF135Q8IUD6 AC005520.4-201ENST00000604337 90 ntBASIC2.2□□□□□ -2.06
RNF135Q8IUD6 ZNF209P-201ENST00000593450 2304 ntBASIC2.2□□□□□ -2.06
RNF135Q8IUD6 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
RNF135Q8IUD6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RNF135Q8IUD6 RNU6-403P-201ENST00000363163 104 ntBASIC2.19□□□□□ -2.06
RNF135Q8IUD6 RNY4P3-201ENST00000365254 95 ntBASIC2.19□□□□□ -2.06
RNF135Q8IUD6 MIR519A1-201ENST00000385257 85 ntBASIC2.19□□□□□ -2.06
RNF135Q8IUD6 HMGN2P38-201ENST00000423806 265 ntBASIC2.19□□□□□ -2.06
RNF135Q8IUD6 RNA5SP182-201ENST00000516064 82 ntBASIC2.19□□□□□ -2.06
RNF135Q8IUD6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.18□□□□□ -2.06
RNF135Q8IUD6 MIR101-2-201ENST00000362195 79 ntBASIC2.18□□□□□ -2.06
RNF135Q8IUD6 RNU6-987P-201ENST00000384759 104 ntBASIC2.18□□□□□ -2.06
RNF135Q8IUD6 MTND4LP19-201ENST00000403051 166 ntBASIC2.18□□□□□ -2.06
RNF135Q8IUD6 RPS27P16-201ENST00000425758 201 ntBASIC2.18□□□□□ -2.06
RNF135Q8IUD6 AC093423.1-201ENST00000440817 142 ntBASIC2.18□□□□□ -2.06
RNF135Q8IUD6 TRMT112P2-201ENST00000512910 132 ntBASIC2.18□□□□□ -2.06
RNF135Q8IUD6 MIR514B-201ENST00000516774 80 ntBASIC2.18□□□□□ -2.06
RNF135Q8IUD6 RNU6-1260P-201ENST00000362944 107 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 RNU6-1054P-201ENST00000411293 104 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 RNU7-185P-201ENST00000459215 60 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 Y_RNA.809-201ENST00000516058 95 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 RN7SKP88-201ENST00000516847 250 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 MIR548H5-201ENST00000580314 60 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 MIR3140-201ENST00000583685 90 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 AC013244.2-201ENST00000603396 103 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 AL359821.1-201ENST00000605519 182 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 RNU7-10P-201ENST00000607194 63 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 7SK.8-201ENST00000612110 250 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 7SK.11-201ENST00000615477 250 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 7SK.13-201ENST00000622040 250 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 AC023934.1-201ENST00000574529 2389 ntBASIC2.17□□□□□ -2.06
RNF135Q8IUD6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RNF135Q8IUD6 RNU6-664P-201ENST00000362381 107 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 Y_RNA.330-201ENST00000365230 109 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 SNORD101-201ENST00000384027 73 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 snoU13.21-201ENST00000459368 105 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 AC048334.1-201ENST00000477975 159 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 MIR4696-201ENST00000581431 70 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 AL096840.1-201ENST00000603287 93 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 U6.100-201ENST00000636230 99 ntBASIC2.16□□□□□ -2.06
RNF135Q8IUD6 RNU6-681P-201ENST00000364012 104 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 MIR9-2-201ENST00000384838 87 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 RNU6-630P-201ENST00000391258 106 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 MIR1257-201ENST00000408490 117 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 RNU4-37P-201ENST00000410214 84 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 Y_RNA.606-201ENST00000410579 103 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 MIR2113-201ENST00000459007 91 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 snoU13.18-201ENST00000459483 104 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 AC008834.1-201ENST00000511612 175 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 MIR3675-201ENST00000583661 73 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.15□□□□□ -2.07
RNF135Q8IUD6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.15□□□□□ -2.07
RNF135Q8IUD6 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.14□□□□□ -2.07
RNF135Q8IUD6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RNF135Q8IUD6 SNORD113.3-201ENST00000364630 78 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 RNU6-895P-201ENST00000384125 103 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 SNORD45A-201ENST00000384512 84 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RNF135Q8IUD6 RNU1-78P-201ENST00000391248 165 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 AC092628.1-201ENST00000436250 252 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 MIR5089-201ENST00000580047 84 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 MIR4422-201ENST00000581938 83 ntBASIC2.14□□□□□ -2.07
RNF135Q8IUD6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RNF135Q8IUD6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
RNF135Q8IUD6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RNF135Q8IUD6 Y_RNA.56-201ENST00000362798 112 ntBASIC2.13□□□□□ -2.07
RNF135Q8IUD6 RNA5SP37-201ENST00000365420 130 ntBASIC2.13□□□□□ -2.07
RNF135Q8IUD6 SNORA48.3-201ENST00000391081 134 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 204.1 ms