Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
LDB1Q86U70 MIR6755-201ENST00000619993 66 ntBASIC0.19□□□□□ -2.38
LDB1Q86U70 MIR924-201ENST00000638017 53 ntBASIC0.19□□□□□ -2.38
LDB1Q86U70 AL512310.12-203ENST00000640543 90 ntBASIC0.19□□□□□ -2.38
LDB1Q86U70 MTND5P18-201ENST00000445624 1801 ntBASIC0.19□□□□□ -2.38
LDB1Q86U70 SNORD63B-201ENST00000411005 70 ntBASIC0.18□□□□□ -2.38
LDB1Q86U70 AC097635.1-201ENST00000450678 155 ntBASIC0.18□□□□□ -2.38
LDB1Q86U70 RNU7-195P-201ENST00000458793 62 ntBASIC0.18□□□□□ -2.38
LDB1Q86U70 RNU6-971P-201ENST00000516920 106 ntBASIC0.18□□□□□ -2.38
LDB1Q86U70 MTND5P40-201ENST00000559945 246 ntBASIC0.18□□□□□ -2.38
LDB1Q86U70 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
LDB1Q86U70 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNU6-170P-201ENST00000362832 104 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNU6-726P-201ENST00000364680 107 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 Y_RNA.344-201ENST00000365381 112 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNY1P5-201ENST00000383890 115 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 Y_RNA.630-201ENST00000411370 108 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNU7-107P-201ENST00000459121 61 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNU6-772P-201ENST00000516042 105 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 SNORA62.5-201ENST00000516634 120 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNU6-850P-201ENST00000516934 103 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 AC067863.3-201ENST00000624172 122 ntBASIC0.17□□□□□ -2.38
LDB1Q86U70 RNA5SP403-201ENST00000363598 108 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 Y_RNA.155-201ENST00000363632 101 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 RNU6-571P-201ENST00000384128 107 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 SNORD38.2-201ENST00000384470 69 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 Y_RNA.525-201ENST00000384570 113 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 MT-TR-201ENST00000387439 65 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 Y_RNA.809-201ENST00000516058 95 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.16□□□□□ -2.38
LDB1Q86U70 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.16□□□□□ -2.38
LDB1Q86U70 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 RNU6-774P-201ENST00000363238 107 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 RNY4P6-201ENST00000363667 96 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 MIR519A1-201ENST00000385257 85 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 MIR760-201ENST00000390220 80 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 MIR548I1-201ENST00000408810 149 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 SPINT5P-201ENST00000448174 155 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 RNU7-106P-201ENST00000459514 67 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 MIR8087-201ENST00000612745 78 ntBASIC0.15□□□□□ -2.39
LDB1Q86U70 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.15□□□□□ -2.39
LDB1Q86U70 AL157777.2-201ENST00000258070 137 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 RNU6-363P-201ENST00000362895 105 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 Y_RNA.346-201ENST00000365385 112 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 MIR539-201ENST00000365690 78 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 SNORA2A-201ENST00000383885 135 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 RNU6-409P-201ENST00000384114 104 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 Y_RNA.507-201ENST00000384500 99 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 MIR516A2-201ENST00000384888 90 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 MIR516A1-201ENST00000385033 90 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 RNU6-816P-201ENST00000390914 107 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 Y_RNA.586-201ENST00000391146 98 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 RNU6-1268P-201ENST00000391214 107 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 RNU6-1239P-201ENST00000391310 107 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 MIR3133-201ENST00000583157 78 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 AC023932.2-201ENST00000603176 175 ntBASIC0.14□□□□□ -2.39
LDB1Q86U70 Y_RNA.342-201ENST00000365352 113 ntBASIC0.13□□□□□ -2.39
LDB1Q86U70 RNU6-524P-201ENST00000384270 107 ntBASIC0.13□□□□□ -2.39
LDB1Q86U70 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
LDB1Q86U70 RNU6-1232P-201ENST00000516299 86 ntBASIC0.13□□□□□ -2.39
LDB1Q86U70 AL162376.1-201ENST00000624117 175 ntBASIC0.13□□□□□ -2.39
LDB1Q86U70 Y_RNA.247-201ENST00000364500 92 ntBASIC0.12□□□□□ -2.39
LDB1Q86U70 Y_RNA.258-201ENST00000364613 105 ntBASIC0.12□□□□□ -2.39
LDB1Q86U70 Y_RNA.362-201ENST00000365518 110 ntBASIC0.12□□□□□ -2.39
LDB1Q86U70 MIR1197-201ENST00000408818 88 ntBASIC0.12□□□□□ -2.39
LDB1Q86U70 AL353813.1-201ENST00000440700 253 ntBASIC0.12□□□□□ -2.39
LDB1Q86U70 RNA5SP330-201ENST00000517096 96 ntBASIC0.12□□□□□ -2.39
LDB1Q86U70 RNU6-1313P-201ENST00000362622 102 ntBASIC0.11□□□□□ -2.39
LDB1Q86U70 SNORD41.1-201ENST00000391000 69 ntBASIC0.11□□□□□ -2.39
LDB1Q86U70 RNU6-269P-201ENST00000391077 97 ntBASIC0.11□□□□□ -2.39
LDB1Q86U70 RPL39P34-201ENST00000477141 156 ntBASIC0.11□□□□□ -2.39
LDB1Q86U70 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.11□□□□□ -2.39
LDB1Q86U70 RNU6-1006P-201ENST00000516998 103 ntBASIC0.11□□□□□ -2.39
LDB1Q86U70 MIR499B-201ENST00000636498 73 ntBASIC0.11□□□□□ -2.39
LDB1Q86U70 Y_RNA.35-201ENST00000362601 101 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 RNU6-1260P-201ENST00000362944 107 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 RNA5SP128-201ENST00000365305 116 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 MIR548G-201ENST00000408442 89 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 RNU7-13P-201ENST00000516413 62 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 Y_RNA.703-201ENST00000516846 111 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 RNU6-90P-201ENST00000606352 106 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 RNU1-29P-201ENST00000606574 126 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 SNORA70.25-201ENST00000612741 95 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 AL162726.3-218ENST00000636401 95 ntBASIC0.1□□□□□ -2.39
LDB1Q86U70 Y_RNA.57-201ENST00000362806 113 ntBASIC0.09□□□□□ -2.4
LDB1Q86U70 SNORD38.1-201ENST00000363863 68 ntBASIC0.09□□□□□ -2.4
LDB1Q86U70 MIR643-201ENST00000385267 97 ntBASIC0.09□□□□□ -2.4
LDB1Q86U70 RNU6-127P-201ENST00000390897 107 ntBASIC0.09□□□□□ -2.4
LDB1Q86U70 RNU6-1265P-201ENST00000516342 103 ntBASIC0.09□□□□□ -2.4
LDB1Q86U70 MIR6718-201ENST00000616153 80 ntBASIC0.09□□□□□ -2.4
LDB1Q86U70 Y_RNA.85-201ENST00000363014 111 ntBASIC0.08□□□□□ -2.4
LDB1Q86U70 Y_RNA.323-201ENST00000365157 109 ntBASIC0.08□□□□□ -2.4
LDB1Q86U70 RNU6-80P-201ENST00000384195 107 ntBASIC0.08□□□□□ -2.4
LDB1Q86U70 RNU6-1201P-201ENST00000384227 107 ntBASIC0.08□□□□□ -2.4
LDB1Q86U70 Y_RNA.649-201ENST00000459077 103 ntBASIC0.08□□□□□ -2.4
LDB1Q86U70 SNORD33.1-201ENST00000516213 88 ntBASIC0.08□□□□□ -2.4
LDB1Q86U70 RNU6-1018P-201ENST00000516577 106 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms