Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 SNORD115-19-201ENST00000363098 82 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 SNORD115-18-201ENST00000363293 82 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.213-201ENST00000364178 111 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.221-201ENST00000364248 96 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 SNORD115-17-201ENST00000364612 82 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.464-201ENST00000384282 110 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.528-201ENST00000384575 108 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 MTND4LP9-201ENST00000427694 174 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 RNU6-1234P-201ENST00000516877 103 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 AC069113.3-201ENST00000521019 150 ntBASIC0.19□□□□□ -2.38
NPHP3Q7Z494 RNU6-726P-201ENST00000364680 107 ntBASIC0.18□□□□□ -2.38
NPHP3Q7Z494 RNU6-1126P-201ENST00000384002 107 ntBASIC0.18□□□□□ -2.38
NPHP3Q7Z494 MIR759-201ENST00000390224 91 ntBASIC0.18□□□□□ -2.38
NPHP3Q7Z494 MIR1265-201ENST00000408444 86 ntBASIC0.18□□□□□ -2.38
NPHP3Q7Z494 RNA5SP136-201ENST00000410906 107 ntBASIC0.18□□□□□ -2.38
NPHP3Q7Z494 RNU7-104P-201ENST00000459398 79 ntBASIC0.18□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.360-201ENST00000365512 102 ntBASIC0.17□□□□□ -2.38
NPHP3Q7Z494 MIR599-201ENST00000385069 95 ntBASIC0.17□□□□□ -2.38
NPHP3Q7Z494 MIR548L-201ENST00000408303 86 ntBASIC0.17□□□□□ -2.38
NPHP3Q7Z494 RNU6-1212P-201ENST00000517023 104 ntBASIC0.17□□□□□ -2.38
NPHP3Q7Z494 MIR5589-201ENST00000579442 60 ntBASIC0.17□□□□□ -2.38
NPHP3Q7Z494 RNU7-10P-201ENST00000607194 63 ntBASIC0.17□□□□□ -2.38
NPHP3Q7Z494 RNA5SP403-201ENST00000363598 108 ntBASIC0.16□□□□□ -2.38
NPHP3Q7Z494 RNU6-1232P-201ENST00000516299 86 ntBASIC0.16□□□□□ -2.38
NPHP3Q7Z494 RNU6-1061P-201ENST00000516530 99 ntBASIC0.16□□□□□ -2.38
NPHP3Q7Z494 RNU6-1099P-201ENST00000363533 107 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 Y_RNA.506-201ENST00000384494 102 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 MIR548I2-201ENST00000408348 149 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 RNU6-257P-201ENST00000410238 98 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 SNORA7.5-201ENST00000410672 110 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 SNORD63B-201ENST00000411005 70 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 RNU7-195P-201ENST00000458793 62 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 RNU7-106P-201ENST00000459514 67 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 RNU1-29P-201ENST00000606574 126 ntBASIC0.15□□□□□ -2.38
NPHP3Q7Z494 SNORD58C-201ENST00000365223 64 ntBASIC0.14□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.568-201ENST00000384742 113 ntBASIC0.14□□□□□ -2.39
NPHP3Q7Z494 MIR548D2-201ENST00000384955 97 ntBASIC0.14□□□□□ -2.39
NPHP3Q7Z494 AC025166.1-201ENST00000612411 163 ntBASIC0.14□□□□□ -2.39
NPHP3Q7Z494 RNU6-170P-201ENST00000362832 104 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.343-201ENST00000365354 112 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 SNORA40-201ENST00000388090 126 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 MIR760-201ENST00000390220 80 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.630-201ENST00000411370 108 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 AC097635.1-201ENST00000450678 155 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 RNU7-129P-201ENST00000516128 62 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 RNU6-850P-201ENST00000516934 103 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 MIR4315-1-201ENST00000636800 73 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 MIR4315-2-201ENST00000640925 73 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 MTND5P18-201ENST00000445624 1801 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 SNORA9.1-201ENST00000362412 131 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.344-201ENST00000365381 112 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 RNU6-571P-201ENST00000384128 107 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 RNU6-1211P-201ENST00000459179 105 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.809-201ENST00000516058 95 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 MIR4802-201ENST00000581881 80 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 AL162376.1-201ENST00000624117 175 ntBASIC0.13□□□□□ -2.39
NPHP3Q7Z494 SNORA2A-201ENST00000383885 135 ntBASIC0.12□□□□□ -2.39
NPHP3Q7Z494 RNU6-907P-201ENST00000390924 102 ntBASIC0.12□□□□□ -2.39
NPHP3Q7Z494 RNU6-269P-201ENST00000391077 97 ntBASIC0.12□□□□□ -2.39
NPHP3Q7Z494 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.12□□□□□ -2.39
NPHP3Q7Z494 MTND5P40-201ENST00000559945 246 ntBASIC0.12□□□□□ -2.39
NPHP3Q7Z494 SNORA70.25-201ENST00000612741 95 ntBASIC0.12□□□□□ -2.39
NPHP3Q7Z494 MIR499B-201ENST00000636498 73 ntBASIC0.12□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.247-201ENST00000364500 92 ntBASIC0.11□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.525-201ENST00000384570 113 ntBASIC0.11□□□□□ -2.39
NPHP3Q7Z494 MIR516A2-201ENST00000384888 90 ntBASIC0.11□□□□□ -2.39
NPHP3Q7Z494 MIR516A1-201ENST00000385033 90 ntBASIC0.11□□□□□ -2.39
NPHP3Q7Z494 AL353813.1-201ENST00000440700 253 ntBASIC0.11□□□□□ -2.39
NPHP3Q7Z494 RPL39P34-201ENST00000477141 156 ntBASIC0.11□□□□□ -2.39
NPHP3Q7Z494 AL512310.12-203ENST00000640543 90 ntBASIC0.11□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.35-201ENST00000362601 101 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 RNU6-363P-201ENST00000362895 105 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 Y_RNA.342-201ENST00000365352 113 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 RNY1P5-201ENST00000383890 115 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 RNU6-524P-201ENST00000384270 107 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 MIR519A1-201ENST00000385257 85 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 RNU6-127P-201ENST00000390897 107 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 SNORD41.1-201ENST00000391000 69 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 RNU6-772P-201ENST00000516042 105 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 RNU6-971P-201ENST00000516920 106 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 MIR3668-201ENST00000582138 75 ntBASIC0.1□□□□□ -2.39
NPHP3Q7Z494 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.1□□□□□ -2.39
NPHP3Q7Z494 RNA5SP214-201ENST00000363378 118 ntBASIC0.09□□□□□ -2.4
NPHP3Q7Z494 RNY4P6-201ENST00000363667 96 ntBASIC0.09□□□□□ -2.4
NPHP3Q7Z494 RNA5SP128-201ENST00000365305 116 ntBASIC0.09□□□□□ -2.4
NPHP3Q7Z494 RNU6-209P-201ENST00000384118 107 ntBASIC0.09□□□□□ -2.4
NPHP3Q7Z494 MIR643-201ENST00000385267 97 ntBASIC0.09□□□□□ -2.4
NPHP3Q7Z494 RNU7-107P-201ENST00000459121 61 ntBASIC0.09□□□□□ -2.4
NPHP3Q7Z494 RNU6-1006P-201ENST00000516998 103 ntBASIC0.09□□□□□ -2.4
NPHP3Q7Z494 RNU6-1260P-201ENST00000362944 107 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 Y_RNA.155-201ENST00000363632 101 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 SNORD38.2-201ENST00000384470 69 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 MIR548I1-201ENST00000408810 149 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 SPINT5P-201ENST00000448174 155 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 RNU6-848P-201ENST00000515948 107 ntBASIC0.08□□□□□ -2.4
NPHP3Q7Z494 RNU6-617P-201ENST00000516147 107 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms