Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 MIR34C-201ENST00000384831 77 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 MIR1912-201ENST00000410389 80 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 SNORA7.5-201ENST00000410672 110 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 AL606490.4-201ENST00000423117 127 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 AL606753.1-201ENST00000427435 87 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 MTND5P34-201ENST00000568888 325 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 Y_RNA.155-201ENST00000363632 101 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 Y_RNA.360-201ENST00000365512 102 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-880P-201ENST00000384526 107 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 Y_RNA.536-201ENST00000384621 113 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-291P-201ENST00000384720 107 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-535P-201ENST00000384722 107 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 SNORA19-201ENST00000384737 128 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 MIR548A1-201ENST00000385041 97 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-469P-201ENST00000516253 101 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 MIR5087-201ENST00000635826 76 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 AL512310.12-203ENST00000640543 90 ntBASIC0.79□□□□□ -2.28
KRT28Q7Z3Y7 Y_RNA.309-201ENST00000365046 111 ntBASIC0.78□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-476P-201ENST00000384726 107 ntBASIC0.78□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-816P-201ENST00000390914 107 ntBASIC0.78□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1268P-201ENST00000391214 107 ntBASIC0.78□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1239P-201ENST00000391310 107 ntBASIC0.78□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1064P-201ENST00000410626 104 ntBASIC0.78□□□□□ -2.28
KRT28Q7Z3Y7 MIR18A-201ENST00000362310 71 ntBASIC0.77□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.323-201ENST00000365157 109 ntBASIC0.77□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.377-201ENST00000365644 108 ntBASIC0.77□□□□□ -2.29
KRT28Q7Z3Y7 SNORD116-21-201ENST00000384507 92 ntBASIC0.77□□□□□ -2.29
KRT28Q7Z3Y7 MIR548I2-201ENST00000408348 149 ntBASIC0.77□□□□□ -2.29
KRT28Q7Z3Y7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.77□□□□□ -2.29
KRT28Q7Z3Y7 SNRPGP12-201ENST00000449481 213 ntBASIC0.77□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.56-201ENST00000362798 112 ntBASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.174-201ENST00000363781 105 ntBASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.273-201ENST00000364703 102 ntBASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-409P-201ENST00000384114 104 ntBASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-1201P-201ENST00000384227 107 ntBASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-733P-201ENST00000410759 104 ntBASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 AC068339.1-201ENST00000526965 141 ntBASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.75□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.75□□□□□ -2.29
KRT28Q7Z3Y7 SNORA63.5-201ENST00000363548 123 ntBASIC0.75□□□□□ -2.29
KRT28Q7Z3Y7 SNORD38.2-201ENST00000384470 69 ntBASIC0.75□□□□□ -2.29
KRT28Q7Z3Y7 SNORA31.14-201ENST00000516728 116 ntBASIC0.75□□□□□ -2.29
KRT28Q7Z3Y7 U2.22-201ENST00000636441 106 ntBASIC0.75□□□□□ -2.29
KRT28Q7Z3Y7 U8.6-201ENST00000364939 135 ntBASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 MIR519A1-201ENST00000385257 85 ntBASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-589P-201ENST00000516485 107 ntBASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 MIR4694-201ENST00000578534 80 ntBASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 MIR5009-201ENST00000578736 100 ntBASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 MIR548H5-201ENST00000580314 60 ntBASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-571P-201ENST00000384128 107 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-1081P-201ENST00000384537 107 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 MIR644A-201ENST00000385262 94 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 MIR1265-201ENST00000408444 86 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 SNORA62.5-201ENST00000516634 120 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 MIR3678-201ENST00000578455 94 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 MIR4514-201ENST00000581410 57 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 RNU7-10P-201ENST00000607194 63 ntBASIC0.73□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.49-201ENST00000362714 112 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 SNORD38.1-201ENST00000363863 68 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 RNA5SP245-201ENST00000364239 121 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.247-201ENST00000364500 92 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-1056P-201ENST00000383996 107 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 MIR577-201ENST00000385196 96 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 MIR140-201ENST00000385282 100 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 Y_RNA.629-201ENST00000411368 105 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 AC244505.6-201ENST00000452829 130 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 RNU6-135P-201ENST00000516769 101 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 MTND5P40-201ENST00000559945 246 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 AL442128.1-201ENST00000615151 90 ntBASIC0.72□□□□□ -2.29
KRT28Q7Z3Y7 RNY1P8-201ENST00000383970 114 ntBASIC0.71□□□□□ -2.3
KRT28Q7Z3Y7 MIR635-201ENST00000384830 98 ntBASIC0.71□□□□□ -2.3
KRT28Q7Z3Y7 RNA5SP63-201ENST00000391225 112 ntBASIC0.71□□□□□ -2.3
KRT28Q7Z3Y7 BX276092.1-201ENST00000427368 251 ntBASIC0.71□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-412P-201ENST00000516434 106 ntBASIC0.71□□□□□ -2.3
KRT28Q7Z3Y7 AC243829.6-201ENST00000612652 106 ntBASIC0.71□□□□□ -2.3
KRT28Q7Z3Y7 Y_RNA.173-201ENST00000363776 113 ntBASIC0.7□□□□□ -2.3
KRT28Q7Z3Y7 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.7□□□□□ -2.3
KRT28Q7Z3Y7 MIR6129-201ENST00000616087 109 ntBASIC0.7□□□□□ -2.3
KRT28Q7Z3Y7 RNY3P2-201ENST00000362918 102 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-1099P-201ENST00000363533 107 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 SNORD18A-201ENST00000363753 72 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-1107P-201ENST00000364817 104 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 Y_RNA.291-201ENST00000364886 113 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-1014P-201ENST00000383940 103 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 AC138869.1-201ENST00000568623 124 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 MIR4636-201ENST00000582271 80 ntBASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.69□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-170P-201ENST00000362832 104 ntBASIC0.68□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-832P-201ENST00000363319 107 ntBASIC0.68□□□□□ -2.3
KRT28Q7Z3Y7 RNU6-1229P-201ENST00000364295 107 ntBASIC0.68□□□□□ -2.3
KRT28Q7Z3Y7 Y_RNA.567-201ENST00000384736 106 ntBASIC0.68□□□□□ -2.3
KRT28Q7Z3Y7 SPINT5P-201ENST00000448174 155 ntBASIC0.68□□□□□ -2.3
KRT28Q7Z3Y7 TRAJ51-201ENST00000504127 63 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms