Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 MIR532-201ENST00000385025 91 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 MTATP8P2-201ENST00000435212 202 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 SNRPGP12-201ENST00000449481 213 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 U7.7-201ENST00000459276 60 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 MIR4452-201ENST00000583004 71 ntBASIC1.13□□□□□ -2.23
CCDC178Q5BJE1 RNU6-571P-201ENST00000384128 107 ntBASIC1.12□□□□□ -2.23
CCDC178Q5BJE1 RNU6-905P-201ENST00000384434 107 ntBASIC1.12□□□□□ -2.23
CCDC178Q5BJE1 RNU6-765P-201ENST00000516916 99 ntBASIC1.12□□□□□ -2.23
CCDC178Q5BJE1 AC103810.9-201ENST00000606688 112 ntBASIC1.12□□□□□ -2.23
CCDC178Q5BJE1 AC103810.7-201ENST00000607821 91 ntBASIC1.12□□□□□ -2.23
CCDC178Q5BJE1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.12□□□□□ -2.23
CCDC178Q5BJE1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC178Q5BJE1 RNU6-640P-201ENST00000363693 105 ntBASIC1.11□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.173-201ENST00000363776 113 ntBASIC1.11□□□□□ -2.23
CCDC178Q5BJE1 RNU6-813P-201ENST00000384691 107 ntBASIC1.11□□□□□ -2.23
CCDC178Q5BJE1 MIR181B2-201ENST00000385004 89 ntBASIC1.11□□□□□ -2.23
CCDC178Q5BJE1 RNU6-448P-201ENST00000517052 107 ntBASIC1.11□□□□□ -2.23
CCDC178Q5BJE1 RNU6-1244P-201ENST00000363614 108 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.536-201ENST00000384621 113 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 RNU6-291P-201ENST00000384720 107 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 MIR635-201ENST00000384830 98 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 MIR518E-201ENST00000385252 88 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 Y_RNA.705-201ENST00000516862 110 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 MIR548H5-201ENST00000580314 60 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 MIR4439-201ENST00000583746 80 ntBASIC1.1□□□□□ -2.23
CCDC178Q5BJE1 MIR516A2-201ENST00000384888 90 ntBASIC1.09□□□□□ -2.23
CCDC178Q5BJE1 MIR516A1-201ENST00000385033 90 ntBASIC1.09□□□□□ -2.23
CCDC178Q5BJE1 RNA5SP255-201ENST00000516370 107 ntBASIC1.09□□□□□ -2.23
CCDC178Q5BJE1 U7.3-201ENST00000616123 62 ntBASIC1.09□□□□□ -2.23
CCDC178Q5BJE1 MIR2052-201ENST00000636055 55 ntBASIC1.09□□□□□ -2.23
CCDC178Q5BJE1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CCDC178Q5BJE1 RNU6-1125P-201ENST00000363601 107 ntBASIC1.08□□□□□ -2.24
CCDC178Q5BJE1 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
CCDC178Q5BJE1 Y_RNA.342-201ENST00000365352 113 ntBASIC1.08□□□□□ -2.24
CCDC178Q5BJE1 RNU6-480P-201ENST00000384332 107 ntBASIC1.08□□□□□ -2.24
CCDC178Q5BJE1 SNORD99-201ENST00000408612 74 ntBASIC1.08□□□□□ -2.24
CCDC178Q5BJE1 SNORD63B-201ENST00000411005 70 ntBASIC1.08□□□□□ -2.24
CCDC178Q5BJE1 TRAJ51-201ENST00000504127 63 ntBASIC1.08□□□□□ -2.24
CCDC178Q5BJE1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 Y_RNA.96-201ENST00000363092 109 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 Y_RNA.466-201ENST00000384294 113 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 MIR489-201ENST00000384923 84 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 RNU6-887P-201ENST00000410660 100 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 AC092628.1-201ENST00000436250 252 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 AC011195.1-201ENST00000578177 177 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 AC025627.3-201ENST00000582078 182 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 RNU7-10P-201ENST00000607194 63 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 AC025521.1-201ENST00000621624 286 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 MIR6767-201ENST00000637302 66 ntBASIC1.07□□□□□ -2.24
CCDC178Q5BJE1 RNA5SP245-201ENST00000364239 121 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 RNU6-1131P-201ENST00000364955 107 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 RNA5SP117-201ENST00000365294 118 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 RNU6-972P-201ENST00000391208 107 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 RNU7-195P-201ENST00000458793 62 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 RNU7-106P-201ENST00000459514 67 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 RPL39P28-201ENST00000465655 155 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 AP003327.1-201ENST00000529684 127 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 MALAT1.1-201ENST00000618249 95 ntBASIC1.06□□□□□ -2.24
CCDC178Q5BJE1 Y_RNA.32-201ENST00000362589 110 ntBASIC1.05□□□□□ -2.24
CCDC178Q5BJE1 MIR488-201ENST00000365739 83 ntBASIC1.05□□□□□ -2.24
CCDC178Q5BJE1 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
CCDC178Q5BJE1 SNORA31.14-201ENST00000516728 116 ntBASIC1.05□□□□□ -2.24
CCDC178Q5BJE1 RNU6-158P-201ENST00000517104 100 ntBASIC1.05□□□□□ -2.24
CCDC178Q5BJE1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC178Q5BJE1 Y_RNA.290-201ENST00000364879 114 ntBASIC1.04□□□□□ -2.24
CCDC178Q5BJE1 RNY1P7-201ENST00000384743 110 ntBASIC1.04□□□□□ -2.24
CCDC178Q5BJE1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
CCDC178Q5BJE1 RNA5SP170-201ENST00000517150 101 ntBASIC1.04□□□□□ -2.24
CCDC178Q5BJE1 AL513043.2-201ENST00000573941 143 ntBASIC1.04□□□□□ -2.24
CCDC178Q5BJE1 RNU6-243P-201ENST00000391140 107 ntBASIC1.03□□□□□ -2.24
CCDC178Q5BJE1 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
CCDC178Q5BJE1 AC002350.1-201ENST00000490759 375 ntBASIC1.03□□□□□ -2.24
CCDC178Q5BJE1 AC138907.6-201ENST00000568401 126 ntBASIC1.03□□□□□ -2.24
CCDC178Q5BJE1 AC138869.1-201ENST00000568623 124 ntBASIC1.03□□□□□ -2.24
CCDC178Q5BJE1 MIR3612-201ENST00000579753 87 ntBASIC1.03□□□□□ -2.24
CCDC178Q5BJE1 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
CCDC178Q5BJE1 Y_RNA.220-201ENST00000364244 109 ntBASIC1.02□□□□□ -2.25
CCDC178Q5BJE1 MIR573-201ENST00000384964 99 ntBASIC1.02□□□□□ -2.25
CCDC178Q5BJE1 MIR644A-201ENST00000385262 94 ntBASIC1.02□□□□□ -2.25
CCDC178Q5BJE1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.02□□□□□ -2.25
CCDC178Q5BJE1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.02□□□□□ -2.25
CCDC178Q5BJE1 AL078603.1-201ENST00000603824 313 ntBASIC1.02□□□□□ -2.25
CCDC178Q5BJE1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 MIR373-201ENST00000362273 69 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 Y_RNA.190-201ENST00000363964 101 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 SNORD58A-201ENST00000383875 65 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 MIR599-201ENST00000385069 95 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 RNA5SP222-201ENST00000411039 105 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 snoU13.18-201ENST00000459483 104 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 RNU6-469P-201ENST00000516253 101 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 Y_RNA.694-201ENST00000516677 117 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 MIR4661-201ENST00000582720 75 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 uc_338.16-201ENST00000621804 95 ntBASIC1.01□□□□□ -2.25
CCDC178Q5BJE1 RNU6-1298P-201ENST00000362456 101 ntBASIC1□□□□□ -2.25
CCDC178Q5BJE1 Y_RNA.221-201ENST00000364248 96 ntBASIC1□□□□□ -2.25
CCDC178Q5BJE1 MIR5582-201ENST00000579697 68 ntBASIC1□□□□□ -2.25
CCDC178Q5BJE1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.99□□□□□ -2.25
CCDC178Q5BJE1 RNU6-49P-201ENST00000384256 107 ntBASIC0.99□□□□□ -2.25
CCDC178Q5BJE1 AL161932.1-201ENST00000437408 146 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 269.8 ms