Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 Y_RNA.309-201ENST00000365046 111 ntBASIC0.58□□□□□ -2.32
KRTCAP3Q53RY4 MIR3678-201ENST00000578455 94 ntBASIC0.58□□□□□ -2.32
KRTCAP3Q53RY4 MIR5009-201ENST00000578736 100 ntBASIC0.58□□□□□ -2.32
KRTCAP3Q53RY4 MIR6129-201ENST00000616087 109 ntBASIC0.58□□□□□ -2.32
KRTCAP3Q53RY4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-1201P-201ENST00000384227 107 ntBASIC0.57□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-880P-201ENST00000384526 107 ntBASIC0.57□□□□□ -2.32
KRTCAP3Q53RY4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.57□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-469P-201ENST00000516253 101 ntBASIC0.57□□□□□ -2.32
KRTCAP3Q53RY4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-834P-201ENST00000362367 110 ntBASIC0.56□□□□□ -2.32
KRTCAP3Q53RY4 SNORD114-23-201ENST00000363536 72 ntBASIC0.56□□□□□ -2.32
KRTCAP3Q53RY4 MIR577-201ENST00000385196 96 ntBASIC0.56□□□□□ -2.32
KRTCAP3Q53RY4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.56□□□□□ -2.32
KRTCAP3Q53RY4 AC010487.4-201ENST00000637027 61 ntBASIC0.56□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-1056P-201ENST00000383996 107 ntBASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 MIR193B-201ENST00000384907 83 ntBASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 MIR548I2-201ENST00000408348 149 ntBASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 TRAJ51-201ENST00000504127 63 ntBASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 MIR548H5-201ENST00000580314 60 ntBASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 AL442128.1-201ENST00000615151 90 ntBASIC0.55□□□□□ -2.32
KRTCAP3Q53RY4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-1290P-201ENST00000362957 109 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 SNORD18A-201ENST00000363753 72 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 SNORD38.1-201ENST00000363863 68 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-1107P-201ENST00000364817 104 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 Y_RNA.323-201ENST00000365157 109 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-1014P-201ENST00000383940 103 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 MIR635-201ENST00000384830 98 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 SNRPGP12-201ENST00000449481 213 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-135P-201ENST00000516769 101 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-850P-201ENST00000516934 103 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 MTND5P40-201ENST00000559945 246 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 MIR4711-201ENST00000578274 70 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 MIR3613-201ENST00000579844 87 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.54□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 SNORD38.2-201ENST00000384470 69 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-1081P-201ENST00000384537 107 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 MIR548G-201ENST00000408442 89 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 SPINT5P-201ENST00000448174 155 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-412P-201ENST00000516434 106 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 MIR1273G-201ENST00000577677 100 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 MIR4694-201ENST00000578534 80 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 RNU6-90P-201ENST00000606352 106 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
KRTCAP3Q53RY4 RNY3P2-201ENST00000362918 102 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-832P-201ENST00000363319 107 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.273-201ENST00000364703 102 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.377-201ENST00000365644 108 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-571P-201ENST00000384128 107 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 RNU7-106P-201ENST00000459514 67 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-589P-201ENST00000516485 107 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 RNA5SP94-201ENST00000516917 108 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 AC138869.1-201ENST00000568623 124 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 AC092634.7-201ENST00000621022 103 ntBASIC0.52□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-170P-201ENST00000362832 104 ntBASIC0.51□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.291-201ENST00000364886 113 ntBASIC0.51□□□□□ -2.33
KRTCAP3Q53RY4 RNA5SP193-201ENST00000410353 107 ntBASIC0.51□□□□□ -2.33
KRTCAP3Q53RY4 SNORD63B-201ENST00000411005 70 ntBASIC0.51□□□□□ -2.33
KRTCAP3Q53RY4 AC244505.6-201ENST00000452829 130 ntBASIC0.51□□□□□ -2.33
KRTCAP3Q53RY4 RNU7-10P-201ENST00000607194 63 ntBASIC0.51□□□□□ -2.33
KRTCAP3Q53RY4 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
KRTCAP3Q53RY4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 RNA5SP325-201ENST00000363756 130 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.173-201ENST00000363776 113 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 RNA5SP517-201ENST00000364724 117 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 SNORD28-201ENST00000384706 75 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.629-201ENST00000411368 105 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-1163P-201ENST00000364516 107 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-1325P-201ENST00000364905 105 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 MIR516A2-201ENST00000384888 90 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 MIR516A1-201ENST00000385033 90 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 RNU7-195P-201ENST00000458793 62 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 Y_RNA.709-201ENST00000516952 92 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 RNA5SP47-201ENST00000517230 109 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 AC141557.1-201ENST00000540982 400 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 MIR548AI-201ENST00000579940 88 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 MIR4639-201ENST00000584938 69 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 AC244669.1-204ENST00000621564 178 ntBASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
KRTCAP3Q53RY4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
KRTCAP3Q53RY4 SNORD115-24-201ENST00000363528 82 ntBASIC0.48□□□□□ -2.33
KRTCAP3Q53RY4 RNU6-106P-201ENST00000384405 107 ntBASIC0.48□□□□□ -2.33
KRTCAP3Q53RY4 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
KRTCAP3Q53RY4 SNORA19.1-201ENST00000410656 129 ntBASIC0.48□□□□□ -2.33
KRTCAP3Q53RY4 AC096720.1-201ENST00000604441 183 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms