Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU6-493P-201ENST00000391321 108 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 RNY3P16-201ENST00000516338 101 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 AC145423.2-201ENST00000610631 239 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 TRDV1-202ENST00000621643 102 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 SNORA49-201ENST00000386157 136 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.89□□□□□ -2.55
ZNF404Q494X3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 AL160413.1-201ENST00000622780 310 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 AC134503.1-201ENST00000633048 54 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 MTND4P29-201ENST00000503122 1372 ntBASIC-0.89□□□□□ -2.55
ZNF404Q494X3 SNORD115-25-201ENST00000362619 82 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 RNU6-818P-201ENST00000364837 108 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 SNORD38.2-201ENST00000384470 69 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 RNU6-768P-201ENST00000384683 107 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 RNY1P7-201ENST00000384743 110 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 MIR548P-201ENST00000408336 84 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 MTND1P19-201ENST00000511780 315 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 RNU6-881P-201ENST00000516813 102 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 MIR3149-201ENST00000584629 83 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 U6.100-201ENST00000636230 99 ntBASIC-0.9□□□□□ -2.55
ZNF404Q494X3 RNU6-502P-201ENST00000362419 108 ntBASIC-0.91□□□□□ -2.56
ZNF404Q494X3 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.91□□□□□ -2.56
ZNF404Q494X3 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.91□□□□□ -2.56
ZNF404Q494X3 MIR196A1-201ENST00000388006 70 ntBASIC-0.91□□□□□ -2.56
ZNF404Q494X3 snoU13.13-201ENST00000458842 104 ntBASIC-0.91□□□□□ -2.56
ZNF404Q494X3 SNORD38.3-201ENST00000516599 73 ntBASIC-0.91□□□□□ -2.56
ZNF404Q494X3 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.91□□□□□ -2.56
ZNF404Q494X3 SNORD36A-201ENST00000362874 73 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 SNORD27-201ENST00000363981 72 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 RNY4P28-201ENST00000365281 93 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 MIR216B-201ENST00000390186 82 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 RNU6-243P-201ENST00000391140 107 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 RNU6-985P-201ENST00000410182 104 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 U6.104-201ENST00000637979 90 ntBASIC-0.92□□□□□ -2.56
ZNF404Q494X3 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 RNU4-36P-201ENST00000364294 144 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 SNORD2-201ENST00000459163 69 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.93□□□□□ -2.56
ZNF404Q494X3 MIR4308-201ENST00000580634 81 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 RNU6-86P-201ENST00000606534 107 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 U4.1-201ENST00000620349 87 ntBASIC-0.93□□□□□ -2.56
ZNF404Q494X3 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 RNY4P3-201ENST00000365254 95 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 MT-TW-201ENST00000387382 68 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 SNORA75.5-201ENST00000391291 81 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 MIR1302-6-201ENST00000408466 90 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 AL161932.1-201ENST00000437408 146 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 RNY4P20-201ENST00000516678 93 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 MIR548O2-201ENST00000616090 70 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.94□□□□□ -2.56
ZNF404Q494X3 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 RNU6-973P-201ENST00000364690 107 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 MIR518B-201ENST00000385127 83 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 RNU6-521P-201ENST00000516663 105 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 MIR3171-201ENST00000584270 74 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 U6.106-201ENST00000636360 105 ntBASIC-0.95□□□□□ -2.56
ZNF404Q494X3 SNORD115-19-201ENST00000363098 82 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 SNORD115-18-201ENST00000363293 82 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 SNORD115-17-201ENST00000364612 82 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 RNY3P14-201ENST00000384309 102 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 SNORD83B-201ENST00000386745 93 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 RNU6-138P-201ENST00000515952 107 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 MIR8062-201ENST00000621515 85 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 MTND5P18-201ENST00000445624 1801 ntBASIC-0.96□□□□□ -2.56
ZNF404Q494X3 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 RNU6-957P-201ENST00000363652 99 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 RNU6-721P-201ENST00000410155 105 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 MIR3179-1-201ENST00000578940 84 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 MIR3179-2-201ENST00000579107 84 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 MIR3179-3-201ENST00000579566 84 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.97□□□□□ -2.56
ZNF404Q494X3 AL137067.1-201ENST00000615933 120 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 MIR3179-4-201ENST00000617599 84 ntBASIC-0.97□□□□□ -2.56
ZNF404Q494X3 RNU6-508P-201ENST00000363231 103 ntBASIC-0.98□□□□□ -2.57
ZNF404Q494X3 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.98□□□□□ -2.57
ZNF404Q494X3 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms