Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RNA5SP268-201ENST00000516828 124 ntBASIC0.44□□□□□ -2.34
CLDN20P56880 PVT1_3.1-201ENST00000620853 95 ntBASIC0.44□□□□□ -2.34
CLDN20P56880 AC244669.1-204ENST00000621564 178 ntBASIC0.44□□□□□ -2.34
CLDN20P56880 AL035470.1-201ENST00000622571 220 ntBASIC0.44□□□□□ -2.34
CLDN20P56880 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
CLDN20P56880 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
CLDN20P56880 RNU6-170P-201ENST00000362832 104 ntBASIC0.43□□□□□ -2.34
CLDN20P56880 MIR548A1-201ENST00000385041 97 ntBASIC0.43□□□□□ -2.34
CLDN20P56880 RNU6-1006P-201ENST00000516998 103 ntBASIC0.43□□□□□ -2.34
CLDN20P56880 SNORA25.18-201ENST00000607153 114 ntBASIC0.43□□□□□ -2.34
CLDN20P56880 AC132825.6-201ENST00000638861 357 ntBASIC0.43□□□□□ -2.34
CLDN20P56880 AC091304.10-201ENST00000641554 121 ntBASIC0.43□□□□□ -2.34
CLDN20P56880 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 SNORD38.1-201ENST00000363863 68 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 RNA5SP193-201ENST00000410353 107 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 SNORD63B-201ENST00000411005 70 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 RNU6-850P-201ENST00000516934 103 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 MTND5P40-201ENST00000559945 246 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 MIR4711-201ENST00000578274 70 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 AC243829.3-201ENST00000622177 108 ntBASIC0.42□□□□□ -2.34
CLDN20P56880 Y_RNA.49-201ENST00000362714 112 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 Y_RNA.261-201ENST00000364631 102 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 Y_RNA.342-201ENST00000365352 113 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 RNU6-1201P-201ENST00000384227 107 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 RNU6-1117P-201ENST00000384525 104 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 Y_RNA.549-201ENST00000384657 102 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 MIR599-201ENST00000385069 95 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
CLDN20P56880 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 RNA5SP227-201ENST00000516184 113 ntBASIC0.41□□□□□ -2.34
CLDN20P56880 MIR548G-201ENST00000408442 89 ntBASIC0.4□□□□□ -2.35
CLDN20P56880 RNU6-62P-201ENST00000516526 102 ntBASIC0.4□□□□□ -2.35
CLDN20P56880 RNU6-90P-201ENST00000606352 106 ntBASIC0.4□□□□□ -2.35
CLDN20P56880 AL365222.1-201ENST00000614661 98 ntBASIC0.4□□□□□ -2.35
CLDN20P56880 AL442128.1-201ENST00000615151 90 ntBASIC0.4□□□□□ -2.35
CLDN20P56880 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.4□□□□□ -2.35
CLDN20P56880 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
CLDN20P56880 MIRLET7D-201ENST00000362263 87 ntBASIC0.39□□□□□ -2.35
CLDN20P56880 Y_RNA.35-201ENST00000362601 101 ntBASIC0.39□□□□□ -2.35
CLDN20P56880 Y_RNA.377-201ENST00000365644 108 ntBASIC0.39□□□□□ -2.35
CLDN20P56880 SPINT5P-201ENST00000448174 155 ntBASIC0.39□□□□□ -2.35
CLDN20P56880 Y_RNA.809-201ENST00000516058 95 ntBASIC0.39□□□□□ -2.35
CLDN20P56880 AC068339.1-201ENST00000526965 141 ntBASIC0.39□□□□□ -2.35
CLDN20P56880 MIR7107-201ENST00000611489 80 ntBASIC0.39□□□□□ -2.35
CLDN20P56880 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.39□□□□□ -2.35
CLDN20P56880 RNU6-1099P-201ENST00000363533 107 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 RNA5SP403-201ENST00000363598 108 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 Y_RNA.247-201ENST00000364500 92 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 RNU6-22P-201ENST00000384355 107 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 RNU6-880P-201ENST00000384526 107 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 RNU7-195P-201ENST00000458793 62 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.38□□□□□ -2.35
CLDN20P56880 RNU7-161P-201ENST00000517289 62 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 MIR4694-201ENST00000578534 80 ntBASIC0.38□□□□□ -2.35
CLDN20P56880 RNU6-1260P-201ENST00000362944 107 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 SNORD44.1-201ENST00000363202 61 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 Y_RNA.281-201ENST00000364774 94 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 U8.6-201ENST00000364939 135 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 SNORD116-21-201ENST00000384507 92 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 MIR577-201ENST00000385196 96 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 RNU7-104P-201ENST00000459398 79 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 RNU6-863P-201ENST00000515989 104 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 AC096720.1-201ENST00000604441 183 ntBASIC0.37□□□□□ -2.35
CLDN20P56880 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.37□□□□□ -2.35
CLDN20P56880 Y_RNA.173-201ENST00000363776 113 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 Y_RNA.221-201ENST00000364248 96 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 RNA5SP205-201ENST00000364653 136 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 SNORD113-1-201ENST00000365321 69 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 MIR216A-201ENST00000385063 110 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 RNU6-1168P-201ENST00000390831 104 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 RNU2-59P-201ENST00000410482 191 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 RNU7-106P-201ENST00000459514 67 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 RNU6-479P-201ENST00000516348 105 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 RNU6-412P-201ENST00000516434 106 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 MIR5009-201ENST00000578736 100 ntBASIC0.36□□□□□ -2.35
CLDN20P56880 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 RNY3P2-201ENST00000362918 102 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 RNU6-1126P-201ENST00000384002 107 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 MIR516A2-201ENST00000384888 90 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 MIR516A1-201ENST00000385033 90 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 MIR548L-201ENST00000408303 86 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 AC243829.6-201ENST00000612652 106 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
CLDN20P56880 Y_RNA.57-201ENST00000362806 113 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-832P-201ENST00000363319 107 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-726P-201ENST00000364680 107 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 Y_RNA.323-201ENST00000365157 109 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-1144P-201ENST00000384247 104 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-476P-201ENST00000384726 107 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-1254P-201ENST00000391266 104 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-313P-201ENST00000516317 112 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-789P-201ENST00000517105 102 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.34□□□□□ -2.36
CLDN20P56880 RNU6-834P-201ENST00000362367 110 ntBASIC0.33□□□□□ -2.36
CLDN20P56880 RNU6-1064P-201ENST00000410626 104 ntBASIC0.33□□□□□ -2.36
CLDN20P56880 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.33□□□□□ -2.36
CLDN20P56880 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.33□□□□□ -2.36
CLDN20P56880 MIR103A1-201ENST00000362165 78 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 203.4 ms