Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AC138869.1-201ENST00000568623 124 ntBASIC0.65□□□□□ -2.31
CDH12P55289 AC091304.10-201ENST00000641554 121 ntBASIC0.65□□□□□ -2.31
CDH12P55289 Y_RNA.78-201ENST00000362970 110 ntBASIC0.64□□□□□ -2.31
CDH12P55289 Y_RNA.342-201ENST00000365352 113 ntBASIC0.64□□□□□ -2.31
CDH12P55289 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
CDH12P55289 MIR1302-5-201ENST00000408164 150 ntBASIC0.64□□□□□ -2.31
CDH12P55289 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
CDH12P55289 AC004941.2-201ENST00000427009 228 ntBASIC0.64□□□□□ -2.31
CDH12P55289 AC244505.6-201ENST00000452829 130 ntBASIC0.64□□□□□ -2.31
CDH12P55289 Y_RNA.659-201ENST00000515994 113 ntBASIC0.64□□□□□ -2.31
CDH12P55289 RNU6-469P-201ENST00000516253 101 ntBASIC0.64□□□□□ -2.31
CDH12P55289 RNU4-36P-201ENST00000364294 144 ntBASIC0.63□□□□□ -2.31
CDH12P55289 SNORA25.9-201ENST00000365087 128 ntBASIC0.63□□□□□ -2.31
CDH12P55289 Y_RNA.567-201ENST00000384736 106 ntBASIC0.63□□□□□ -2.31
CDH12P55289 MIR516A2-201ENST00000384888 90 ntBASIC0.63□□□□□ -2.31
CDH12P55289 MIR516A1-201ENST00000385033 90 ntBASIC0.63□□□□□ -2.31
CDH12P55289 AL035461.1-201ENST00000421490 332 ntBASIC0.63□□□□□ -2.31
CDH12P55289 AC109327.2-201ENST00000448339 378 ntBASIC0.63□□□□□ -2.31
CDH12P55289 RNU7-195P-201ENST00000458793 62 ntBASIC0.63□□□□□ -2.31
CDH12P55289 RNA5SP94-201ENST00000516917 108 ntBASIC0.63□□□□□ -2.31
CDH12P55289 RNU6-537P-201ENST00000517277 103 ntBASIC0.63□□□□□ -2.31
CDH12P55289 SNORA63.4-201ENST00000362763 126 ntBASIC0.62□□□□□ -2.31
CDH12P55289 RNU6-755P-201ENST00000364400 103 ntBASIC0.62□□□□□ -2.31
CDH12P55289 RNU1-93P-201ENST00000364704 169 ntBASIC0.62□□□□□ -2.31
CDH12P55289 MIR590-201ENST00000385008 97 ntBASIC0.62□□□□□ -2.31
CDH12P55289 MIR519A1-201ENST00000385257 85 ntBASIC0.62□□□□□ -2.31
CDH12P55289 Y_RNA.601-201ENST00000410500 113 ntBASIC0.62□□□□□ -2.31
CDH12P55289 MIR548Z-201ENST00000584743 97 ntBASIC0.62□□□□□ -2.31
CDH12P55289 MIR8070-201ENST00000616510 88 ntBASIC0.62□□□□□ -2.31
CDH12P55289 MIR6835-201ENST00000621552 64 ntBASIC0.62□□□□□ -2.31
CDH12P55289 Y_RNA.10-201ENST00000362371 110 ntBASIC0.61□□□□□ -2.31
CDH12P55289 Y_RNA.57-201ENST00000362806 113 ntBASIC0.61□□□□□ -2.31
CDH12P55289 Y_RNA.95-201ENST00000363079 95 ntBASIC0.61□□□□□ -2.31
CDH12P55289 SNORA36.1-201ENST00000363424 132 ntBASIC0.61□□□□□ -2.31
CDH12P55289 SNORD45B-201ENST00000364617 72 ntBASIC0.61□□□□□ -2.31
CDH12P55289 RNU6-44P-201ENST00000384045 107 ntBASIC0.61□□□□□ -2.31
CDH12P55289 SNORA51.5-201ENST00000384126 131 ntBASIC0.61□□□□□ -2.31
CDH12P55289 SNORD28-201ENST00000384706 75 ntBASIC0.61□□□□□ -2.31
CDH12P55289 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.61□□□□□ -2.31
CDH12P55289 AC097635.1-201ENST00000450678 155 ntBASIC0.61□□□□□ -2.31
CDH12P55289 RNU6-795P-201ENST00000516323 103 ntBASIC0.61□□□□□ -2.31
CDH12P55289 RNU6-135P-201ENST00000516769 101 ntBASIC0.61□□□□□ -2.31
CDH12P55289 RNU6-86P-201ENST00000606534 107 ntBASIC0.61□□□□□ -2.31
CDH12P55289 AC012531.4-201ENST00000616509 177 ntBASIC0.61□□□□□ -2.31
CDH12P55289 SNORD115-24-201ENST00000363528 82 ntBASIC0.6□□□□□ -2.31
CDH12P55289 RNU6-1244P-201ENST00000363614 108 ntBASIC0.6□□□□□ -2.31
CDH12P55289 Y_RNA.191-201ENST00000363972 113 ntBASIC0.6□□□□□ -2.31
CDH12P55289 RNU6-756P-201ENST00000383997 107 ntBASIC0.6□□□□□ -2.31
CDH12P55289 MIR599-201ENST00000385069 95 ntBASIC0.6□□□□□ -2.31
CDH12P55289 Y_RNA.809-201ENST00000516058 95 ntBASIC0.6□□□□□ -2.31
CDH12P55289 RNA5SP47-201ENST00000517230 109 ntBASIC0.6□□□□□ -2.31
CDH12P55289 MIR4777-201ENST00000583710 86 ntBASIC0.6□□□□□ -2.31
CDH12P55289 MIR4639-201ENST00000584938 69 ntBASIC0.6□□□□□ -2.31
CDH12P55289 AC244669.1-204ENST00000621564 178 ntBASIC0.6□□□□□ -2.31
CDH12P55289 MIR450A1-201ENST00000362262 91 ntBASIC0.59□□□□□ -2.31
CDH12P55289 RNU6-766P-201ENST00000362478 107 ntBASIC0.59□□□□□ -2.31
CDH12P55289 RNA5SP517-201ENST00000364724 117 ntBASIC0.59□□□□□ -2.31
CDH12P55289 Y_RNA.467-201ENST00000384297 102 ntBASIC0.59□□□□□ -2.31
CDH12P55289 SCARNA23-201ENST00000516060 130 ntBASIC0.59□□□□□ -2.31
CDH12P55289 RNU6-109P-201ENST00000516364 107 ntBASIC0.59□□□□□ -2.31
CDH12P55289 Y_RNA.676-201ENST00000516393 96 ntBASIC0.59□□□□□ -2.31
CDH12P55289 RNU6-184P-201ENST00000516514 107 ntBASIC0.59□□□□□ -2.31
CDH12P55289 RNU7-161P-201ENST00000517289 62 ntBASIC0.59□□□□□ -2.31
CDH12P55289 AL590095.2-201ENST00000604136 117 ntBASIC0.59□□□□□ -2.31
CDH12P55289 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CDH12P55289 SNORD36A-201ENST00000362874 73 ntBASIC0.58□□□□□ -2.32
CDH12P55289 RNU6-1260P-201ENST00000362944 107 ntBASIC0.58□□□□□ -2.32
CDH12P55289 Y_RNA.221-201ENST00000364248 96 ntBASIC0.58□□□□□ -2.32
CDH12P55289 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
CDH12P55289 MIR181B2-201ENST00000385004 89 ntBASIC0.58□□□□□ -2.32
CDH12P55289 RNU6-1254P-201ENST00000391266 104 ntBASIC0.58□□□□□ -2.32
CDH12P55289 MIR1276-201ENST00000408707 83 ntBASIC0.58□□□□□ -2.32
CDH12P55289 MIR4439-201ENST00000583746 80 ntBASIC0.58□□□□□ -2.32
CDH12P55289 MIR6504-201ENST00000613520 61 ntBASIC0.58□□□□□ -2.32
CDH12P55289 RNA5SP403-201ENST00000363598 108 ntBASIC0.57□□□□□ -2.32
CDH12P55289 RNU6-1229P-201ENST00000364295 107 ntBASIC0.57□□□□□ -2.32
CDH12P55289 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
CDH12P55289 RNU6-1113P-201ENST00000384348 107 ntBASIC0.57□□□□□ -2.32
CDH12P55289 AL031737.1-201ENST00000450125 223 ntBASIC0.57□□□□□ -2.32
CDH12P55289 SCARNA16.5-201ENST00000517114 183 ntBASIC0.57□□□□□ -2.32
CDH12P55289 MIR4452-201ENST00000583004 71 ntBASIC0.57□□□□□ -2.32
CDH12P55289 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.57□□□□□ -2.32
CDH12P55289 MIR6828-201ENST00000636181 60 ntBASIC0.57□□□□□ -2.32
CDH12P55289 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.56□□□□□ -2.32
CDH12P55289 Y_RNA.224-201ENST00000364308 111 ntBASIC0.56□□□□□ -2.32
CDH12P55289 SNORD114-22-201ENST00000365423 72 ntBASIC0.56□□□□□ -2.32
CDH12P55289 RNU6-524P-201ENST00000384270 107 ntBASIC0.56□□□□□ -2.32
CDH12P55289 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
CDH12P55289 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
CDH12P55289 AC025521.1-201ENST00000621624 286 ntBASIC0.56□□□□□ -2.32
CDH12P55289 RNU6-1125P-201ENST00000363601 107 ntBASIC0.55□□□□□ -2.32
CDH12P55289 RNU6-480P-201ENST00000384332 107 ntBASIC0.55□□□□□ -2.32
CDH12P55289 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
CDH12P55289 RNU6-813P-201ENST00000384691 107 ntBASIC0.55□□□□□ -2.32
CDH12P55289 MIR520E-201ENST00000384867 87 ntBASIC0.55□□□□□ -2.32
CDH12P55289 MIR499A-201ENST00000384903 122 ntBASIC0.55□□□□□ -2.32
CDH12P55289 RNU6-243P-201ENST00000391140 107 ntBASIC0.55□□□□□ -2.32
CDH12P55289 RPS29P1-201ENST00000465274 159 ntBASIC0.55□□□□□ -2.32
CDH12P55289 RNA5SP268-201ENST00000516828 124 ntBASIC0.55□□□□□ -2.32
CDH12P55289 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms