Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
MSH6P52701 Y_RNA.350-201ENST00000365409 98 ntBASIC-0.42□□□□□ -2.48
MSH6P52701 Y_RNA.459-201ENST00000384251 102 ntBASIC-0.42□□□□□ -2.48
MSH6P52701 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.42□□□□□ -2.48
MSH6P52701 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
MSH6P52701 Y_RNA.668-201ENST00000516233 93 ntBASIC-0.42□□□□□ -2.48
MSH6P52701 RNU7-13P-201ENST00000516413 62 ntBASIC-0.42□□□□□ -2.48
MSH6P52701 MIR148A-201ENST00000362215 68 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU6-170P-201ENST00000362832 104 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU6-508P-201ENST00000363231 103 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU6-309P-201ENST00000364573 106 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU1-141P-201ENST00000364623 158 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 SNORD18B-201ENST00000365659 72 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 MIR516B1-201ENST00000385211 90 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU4-63P-201ENST00000411313 118 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU7-106P-201ENST00000459514 67 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 MIR3128-201ENST00000581957 66 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 MIR376B-201ENST00000614515 100 ntBASIC-0.43□□□□□ -2.48
MSH6P52701 RNU6-47P-201ENST00000383866 107 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 RNU6-571P-201ENST00000384128 107 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 RNU6-616P-201ENST00000384353 107 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 SNORA32.3-201ENST00000384772 121 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 MIR568-201ENST00000385036 95 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 AL603914.1-201ENST00000401964 204 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 MTND5P40-201ENST00000559945 246 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 MIR3666-201ENST00000607845 111 ntBASIC-0.44□□□□□ -2.48
MSH6P52701 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 RNU6-524P-201ENST00000384270 107 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 MTCYBP9-201ENST00000431021 303 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 RNU7-121P-201ENST00000516604 62 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.45□□□□□ -2.48
MSH6P52701 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 MIR106A-201ENST00000384870 81 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 RNU6-239P-201ENST00000390990 99 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 RNU6-111P-201ENST00000517179 105 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 AC062037.2-201ENST00000610137 73 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 AL137067.1-201ENST00000615933 120 ntBASIC-0.45□□□□□ -2.48
MSH6P52701 SNORA63-201ENST00000363450 132 ntBASIC-0.46□□□□□ -2.48
MSH6P52701 RNY1P11-201ENST00000363759 113 ntBASIC-0.46□□□□□ -2.48
MSH6P52701 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.46□□□□□ -2.48
MSH6P52701 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.46□□□□□ -2.48
MSH6P52701 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.46□□□□□ -2.48
MSH6P52701 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.46□□□□□ -2.48
MSH6P52701 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.46□□□□□ -2.48
MSH6P52701 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.47□□□□□ -2.49
MSH6P52701 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.47□□□□□ -2.49
MSH6P52701 RNA5SP300-201ENST00000391197 107 ntBASIC-0.47□□□□□ -2.49
MSH6P52701 AC093423.1-201ENST00000440817 142 ntBASIC-0.47□□□□□ -2.49
MSH6P52701 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.47□□□□□ -2.49
MSH6P52701 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.47□□□□□ -2.49
MSH6P52701 MIR548AG2-201ENST00000581228 64 ntBASIC-0.47□□□□□ -2.49
MSH6P52701 RN7SL660P-201ENST00000614852 299 ntBASIC-0.47□□□□□ -2.49
MSH6P52701 MIR655-201ENST00000362159 97 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 MIR617-201ENST00000385030 97 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 MIR519E-201ENST00000385075 84 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 MIR1302-3-201ENST00000408128 138 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 RNY4P20-201ENST00000516678 93 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 RNU6-850P-201ENST00000516934 103 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 MIR6507-201ENST00000613630 70 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 AC069503.3-201ENST00000618674 145 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 AC087741.2-201ENST00000619415 172 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 uc_338.10-201ENST00000621872 182 ntBASIC-0.48□□□□□ -2.49
MSH6P52701 SNORA20.1-201ENST00000364790 130 ntBASIC-0.49□□□□□ -2.49
MSH6P52701 MIR181B2-201ENST00000385004 89 ntBASIC-0.49□□□□□ -2.49
MSH6P52701 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.49□□□□□ -2.49
MSH6P52701 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.49□□□□□ -2.49
MSH6P52701 RNU6-138P-201ENST00000515952 107 ntBASIC-0.49□□□□□ -2.49
MSH6P52701 AC108081.1-201ENST00000604358 221 ntBASIC-0.49□□□□□ -2.49
MSH6P52701 MIR548AZ-201ENST00000616567 95 ntBASIC-0.49□□□□□ -2.49
MSH6P52701 RNU4-84P-201ENST00000364200 139 ntBASIC-0.5□□□□□ -2.49
MSH6P52701 SNORD115-44-201ENST00000365391 82 ntBASIC-0.5□□□□□ -2.49
MSH6P52701 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.5□□□□□ -2.49
MSH6P52701 MIR34C-201ENST00000384831 77 ntBASIC-0.5□□□□□ -2.49
MSH6P52701 IGKV1-22-201ENST00000524313 326 ntBASIC-0.5□□□□□ -2.49
MSH6P52701 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.5□□□□□ -2.49
MSH6P52701 AL162726.3-218ENST00000636401 95 ntBASIC-0.5□□□□□ -2.49
MSH6P52701 MIR516A2-201ENST00000384888 90 ntBASIC-0.51□□□□□ -2.49
MSH6P52701 MIR516A1-201ENST00000385033 90 ntBASIC-0.51□□□□□ -2.49
MSH6P52701 MT-TQ-201ENST00000387372 72 ntBASIC-0.51□□□□□ -2.49
MSH6P52701 SNORD75.1-201ENST00000408373 60 ntBASIC-0.51□□□□□ -2.49
MSH6P52701 uc_338.36-201ENST00000622331 158 ntBASIC-0.51□□□□□ -2.49
MSH6P52701 MIR3658-201ENST00000636291 56 ntBASIC-0.51□□□□□ -2.49
MSH6P52701 RNU6-811P-201ENST00000384069 107 ntBASIC-0.52□□□□□ -2.49
MSH6P52701 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.52□□□□□ -2.49
MSH6P52701 SNORD37.2-201ENST00000391075 66 ntBASIC-0.52□□□□□ -2.49
MSH6P52701 AC244250.2-201ENST00000418731 148 ntBASIC-0.52□□□□□ -2.49
MSH6P52701 RNU7-6P-201ENST00000516845 62 ntBASIC-0.52□□□□□ -2.49
MSH6P52701 AC022559.1-201ENST00000520905 205 ntBASIC-0.52□□□□□ -2.49
MSH6P52701 U8.6-201ENST00000364939 135 ntBASIC-0.53□□□□□ -2.49
MSH6P52701 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.53□□□□□ -2.49
MSH6P52701 RNU6-521P-201ENST00000516663 105 ntBASIC-0.53□□□□□ -2.49
MSH6P52701 RNU7-188P-201ENST00000517063 64 ntBASIC-0.53□□□□□ -2.49
MSH6P52701 YWHAEP2-201ENST00000580066 112 ntBASIC-0.53□□□□□ -2.49
MSH6P52701 MIR4263-201ENST00000584745 83 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms