Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CLCNKAP51800 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 RNU6-1144P-201ENST00000384247 104 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 SNORD38.2-201ENST00000384470 69 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 MIR635-201ENST00000384830 98 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 MIR577-201ENST00000385196 96 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 SPINT5P-201ENST00000448174 155 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 RNU6-850P-201ENST00000516934 103 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 MIR6129-201ENST00000616087 109 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 AC092634.7-201ENST00000621022 103 ntBASIC0.54□□□□□ -2.32
CLCNKAP51800 RNU6-170P-201ENST00000362832 104 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 SNORA36.1-201ENST00000363424 132 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 SNORD38.1-201ENST00000363863 68 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 Y_RNA.281-201ENST00000364774 94 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 RNU6-571P-201ENST00000384128 107 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 MIR598-201ENST00000384868 97 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 MIR548I2-201ENST00000408348 149 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 SNORD63B-201ENST00000411005 70 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 AC138869.1-201ENST00000568623 124 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 MIR5009-201ENST00000578736 100 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 RNU7-10P-201ENST00000607194 63 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 AL442128.1-201ENST00000615151 90 ntBASIC0.53□□□□□ -2.32
CLCNKAP51800 Y_RNA.49-201ENST00000362714 112 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 RNU6-1229P-201ENST00000364295 107 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 SNORD28-201ENST00000384706 75 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 MIR548G-201ENST00000408442 89 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 AC244505.6-201ENST00000452829 130 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 RNU6-135P-201ENST00000516769 101 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 MIR4694-201ENST00000578534 80 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.52□□□□□ -2.33
CLCNKAP51800 SNORD115-24-201ENST00000363528 82 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 SNORA8.2-201ENST00000384372 139 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 MIR936-201ENST00000401264 98 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 RNU7-195P-201ENST00000458793 62 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 RNA5SP47-201ENST00000517230 109 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 MIR4639-201ENST00000584938 69 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 SNORA25.18-201ENST00000607153 114 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 MIR7111-201ENST00000619751 72 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 PVT1_3.1-201ENST00000620853 95 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 AC244669.1-204ENST00000621564 178 ntBASIC0.51□□□□□ -2.33
CLCNKAP51800 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.51□□□□□ -2.33
CLCNKAP51800 RNU6-1107P-201ENST00000364817 104 ntBASIC0.5□□□□□ -2.33
CLCNKAP51800 Y_RNA.377-201ENST00000365644 108 ntBASIC0.5□□□□□ -2.33
CLCNKAP51800 RNU6-1056P-201ENST00000383996 107 ntBASIC0.5□□□□□ -2.33
CLCNKAP51800 MIR599-201ENST00000385069 95 ntBASIC0.5□□□□□ -2.33
CLCNKAP51800 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.5□□□□□ -2.33
CLCNKAP51800 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.5□□□□□ -2.33
CLCNKAP51800 RNU7-106P-201ENST00000459514 67 ntBASIC0.5□□□□□ -2.33
CLCNKAP51800 RNU6-90P-201ENST00000606352 106 ntBASIC0.5□□□□□ -2.33
CLCNKAP51800 U2.22-201ENST00000636441 106 ntBASIC0.5□□□□□ -2.33
CLCNKAP51800 RNY3P2-201ENST00000362918 102 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 RNU6-832P-201ENST00000363319 107 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 Y_RNA.323-201ENST00000365157 109 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 Y_RNA.342-201ENST00000365352 113 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 RNU6-1014P-201ENST00000383940 103 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 AC097635.1-201ENST00000450678 155 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 RNU6-412P-201ENST00000516434 106 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 RNA5SP268-201ENST00000516828 124 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 SCARNA16.5-201ENST00000517114 183 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 MIR4711-201ENST00000578274 70 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 MIR3613-201ENST00000579844 87 ntBASIC0.49□□□□□ -2.33
CLCNKAP51800 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.49□□□□□ -2.33
CLCNKAP51800 RNU6-1099P-201ENST00000363533 107 ntBASIC0.48□□□□□ -2.33
CLCNKAP51800 Y_RNA.221-201ENST00000364248 96 ntBASIC0.48□□□□□ -2.33
CLCNKAP51800 MIR516A2-201ENST00000384888 90 ntBASIC0.48□□□□□ -2.33
CLCNKAP51800 MIR516A1-201ENST00000385033 90 ntBASIC0.48□□□□□ -2.33
CLCNKAP51800 SNORA68.3-201ENST00000515906 83 ntBASIC0.48□□□□□ -2.33
CLCNKAP51800 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.48□□□□□ -2.33
CLCNKAP51800 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
CLCNKAP51800 RNU6-834P-201ENST00000362367 110 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 Y_RNA.173-201ENST00000363776 113 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 MIR519A1-201ENST00000385257 85 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 RNA5SP193-201ENST00000410353 107 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 SNORA40.8-201ENST00000411034 126 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 RNU7-104P-201ENST00000459398 79 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.47□□□□□ -2.33
CLCNKAP51800 Y_RNA.659-201ENST00000515994 113 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 Y_RNA.809-201ENST00000516058 95 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 RNA5SP227-201ENST00000516184 113 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 RN7SKP12-201ENST00000516275 143 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 RNU7-161P-201ENST00000517289 62 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 AC141557.1-201ENST00000540982 400 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 AC096720.1-201ENST00000604441 183 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 MIR7107-201ENST00000611489 80 ntBASIC0.47□□□□□ -2.33
CLCNKAP51800 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
CLCNKAP51800 Y_RNA.57-201ENST00000362806 113 ntBASIC0.46□□□□□ -2.34
CLCNKAP51800 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
CLCNKAP51800 Y_RNA.540-201ENST00000384638 111 ntBASIC0.46□□□□□ -2.34
CLCNKAP51800 SNORD71-201ENST00000411292 86 ntBASIC0.46□□□□□ -2.34
CLCNKAP51800 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
CLCNKAP51800 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.46□□□□□ -2.34
CLCNKAP51800 AC243829.3-201ENST00000622177 108 ntBASIC0.46□□□□□ -2.34
CLCNKAP51800 MIR6828-201ENST00000636181 60 ntBASIC0.46□□□□□ -2.34
CLCNKAP51800 SNORD118-201ENST00000363593 134 ntBASIC0.45□□□□□ -2.34
CLCNKAP51800 RNA5SP403-201ENST00000363598 108 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 184.4 ms