Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MIR5002-201ENST00000584713 97 ntBASIC2.58□□□□□ -2
PRIM1P49642 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PRIM1P49642 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
PRIM1P49642 Y_RNA.13-201ENST00000362403 112 ntBASIC2.57□□□□□ -2
PRIM1P49642 SNORD113.3-201ENST00000364630 78 ntBASIC2.57□□□□□ -2
PRIM1P49642 RNU6-800P-201ENST00000384473 103 ntBASIC2.57□□□□□ -2
PRIM1P49642 RNU6-935P-201ENST00000410371 100 ntBASIC2.57□□□□□ -2
PRIM1P49642 RNU6-717P-201ENST00000459076 104 ntBASIC2.57□□□□□ -2
PRIM1P49642 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.57□□□□□ -2
PRIM1P49642 MIR378A-201ENST00000362177 66 ntBASIC2.56□□□□□ -2
PRIM1P49642 RNU6-291P-201ENST00000384720 107 ntBASIC2.56□□□□□ -2
PRIM1P49642 Y_RNA.697-201ENST00000516776 113 ntBASIC2.56□□□□□ -2
PRIM1P49642 MIR5694-201ENST00000581190 76 ntBASIC2.56□□□□□ -2
PRIM1P49642 MIR8053-201ENST00000613344 75 ntBASIC2.56□□□□□ -2
PRIM1P49642 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PRIM1P49642 RNA5SP190-201ENST00000365222 118 ntBASIC2.55□□□□□ -2
PRIM1P49642 RNU6-471P-201ENST00000383944 106 ntBASIC2.55□□□□□ -2
PRIM1P49642 RNU6-154P-201ENST00000384306 106 ntBASIC2.55□□□□□ -2
PRIM1P49642 RNU6-540P-201ENST00000384622 101 ntBASIC2.55□□□□□ -2
PRIM1P49642 MIR30A-201ENST00000385092 71 ntBASIC2.55□□□□□ -2
PRIM1P49642 RNU6-663P-201ENST00000391105 106 ntBASIC2.55□□□□□ -2
PRIM1P49642 MIR1265-201ENST00000408444 86 ntBASIC2.55□□□□□ -2
PRIM1P49642 AC093423.1-201ENST00000440817 142 ntBASIC2.55□□□□□ -2
PRIM1P49642 SNORD13-201ENST00000459299 104 ntBASIC2.55□□□□□ -2
PRIM1P49642 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.55□□□□□ -2
PRIM1P49642 Y_RNA.205-201ENST00000364128 113 ntBASIC2.54□□□□□ -2
PRIM1P49642 RNU6-934P-201ENST00000365154 107 ntBASIC2.54□□□□□ -2
PRIM1P49642 MIR125B2-201ENST00000385128 89 ntBASIC2.54□□□□□ -2
PRIM1P49642 U3.27-201ENST00000391237 200 ntBASIC2.54□□□□□ -2
PRIM1P49642 RNA5SP95-201ENST00000410319 137 ntBASIC2.54□□□□□ -2
PRIM1P49642 RNU6-1057P-201ENST00000517162 102 ntBASIC2.54□□□□□ -2
PRIM1P49642 MIR3675-201ENST00000583661 73 ntBASIC2.54□□□□□ -2
PRIM1P49642 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.54□□□□□ -2
PRIM1P49642 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
PRIM1P49642 MIR302D-201ENST00000362275 68 ntBASIC2.53□□□□□ -2
PRIM1P49642 Y_RNA.371-201ENST00000365591 113 ntBASIC2.53□□□□□ -2
PRIM1P49642 MIR599-201ENST00000385069 95 ntBASIC2.53□□□□□ -2
PRIM1P49642 SNORD90-201ENST00000391145 111 ntBASIC2.53□□□□□ -2
PRIM1P49642 snoU13.17-201ENST00000458802 104 ntBASIC2.53□□□□□ -2
PRIM1P49642 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.53□□□□□ -2
PRIM1P49642 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRIM1P49642 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PRIM1P49642 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PRIM1P49642 RNA5SP37-201ENST00000365420 130 ntBASIC2.52□□□□□ -2.01
PRIM1P49642 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRIM1P49642 Y_RNA.386-201ENST00000383913 105 ntBASIC2.52□□□□□ -2.01
PRIM1P49642 SNORA24B-201ENST00000384176 131 ntBASIC2.52□□□□□ -2.01
PRIM1P49642 RNU6-321P-201ENST00000410912 106 ntBASIC2.52□□□□□ -2.01
PRIM1P49642 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PRIM1P49642 RNA5SP160-201ENST00000364866 120 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 SNORD1A-201ENST00000364968 72 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 SNORD115-44-201ENST00000365391 82 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PRIM1P49642 SNORD111-201ENST00000408139 94 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 RNU6-1054P-201ENST00000411293 104 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 MIR3937-201ENST00000580135 106 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 MIR8081-201ENST00000611533 95 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 MIR664A-201ENST00000626086 82 ntBASIC2.51□□□□□ -2.01
PRIM1P49642 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRIM1P49642 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRIM1P49642 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRIM1P49642 RNU6-895P-201ENST00000384125 103 ntBASIC2.5□□□□□ -2.01
PRIM1P49642 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.5□□□□□ -2.01
PRIM1P49642 U6.81-201ENST00000612550 106 ntBASIC2.5□□□□□ -2.01
PRIM1P49642 U6.100-201ENST00000636230 99 ntBASIC2.5□□□□□ -2.01
PRIM1P49642 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PRIM1P49642 RNU4-62P-201ENST00000410125 130 ntBASIC2.49□□□□□ -2.01
PRIM1P49642 RNU6-1265P-201ENST00000516342 103 ntBASIC2.49□□□□□ -2.01
PRIM1P49642 RNU6-752P-201ENST00000516376 102 ntBASIC2.49□□□□□ -2.01
PRIM1P49642 SNORA25.15-201ENST00000516487 89 ntBASIC2.49□□□□□ -2.01
PRIM1P49642 MIR4299-201ENST00000577899 72 ntBASIC2.49□□□□□ -2.01
PRIM1P49642 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PRIM1P49642 MIR216B-201ENST00000390186 82 ntBASIC2.48□□□□□ -2.01
PRIM1P49642 AL606490.4-201ENST00000423117 127 ntBASIC2.48□□□□□ -2.01
PRIM1P49642 RNU7-156P-201ENST00000517214 74 ntBASIC2.48□□□□□ -2.01
PRIM1P49642 MIR3198-2-201ENST00000577868 80 ntBASIC2.48□□□□□ -2.01
PRIM1P49642 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PRIM1P49642 MIR9-3-201ENST00000385084 90 ntBASIC2.47□□□□□ -2.01
PRIM1P49642 SNORD83.1-201ENST00000411362 77 ntBASIC2.47□□□□□ -2.01
PRIM1P49642 AP1B1P2-201ENST00000416196 106 ntBASIC2.47□□□□□ -2.01
PRIM1P49642 HMGN2P38-201ENST00000423806 265 ntBASIC2.47□□□□□ -2.01
PRIM1P49642 AC025033.1-201ENST00000463883 194 ntBASIC2.47□□□□□ -2.01
PRIM1P49642 AC084768.2-201ENST00000622736 221 ntBASIC2.47□□□□□ -2.01
PRIM1P49642 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PRIM1P49642 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.01
PRIM1P49642 MIR451A-201ENST00000385059 72 ntBASIC2.46□□□□□ -2.02
PRIM1P49642 MIR4771-2-201ENST00000577758 74 ntBASIC2.46□□□□□ -2.02
PRIM1P49642 MIR4771-1-201ENST00000582617 74 ntBASIC2.46□□□□□ -2.02
PRIM1P49642 MIR4448-201ENST00000584360 86 ntBASIC2.46□□□□□ -2.02
PRIM1P49642 AL627230.6-201ENST00000611129 280 ntBASIC2.46□□□□□ -2.02
PRIM1P49642 RNU4-52P-201ENST00000384209 138 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 RNU6-364P-201ENST00000384387 107 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 RPS26P5-201ENST00000418544 335 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 RNU1-40P-201ENST00000516816 164 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 RNU1-97P-201ENST00000516872 164 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 AC036111.3-201ENST00000526389 112 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 AC103810.8-201ENST00000607347 118 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PRIM1P49642 MIR8070-201ENST00000616510 88 ntBASIC2.45□□□□□ -2.02
PRIM1P49642 RNU6-535P-201ENST00000384722 107 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms