Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 MIR599-201ENST00000385069 95 ntBASIC0.25□□□□□ -2.37
ACTN1P12814 RNA5SP299-201ENST00000391203 116 ntBASIC0.25□□□□□ -2.37
ACTN1P12814 SNORA7.5-201ENST00000410672 110 ntBASIC0.25□□□□□ -2.37
ACTN1P12814 RNU7-129P-201ENST00000516128 62 ntBASIC0.25□□□□□ -2.37
ACTN1P12814 RNU7-161P-201ENST00000517289 62 ntBASIC0.25□□□□□ -2.37
ACTN1P12814 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
ACTN1P12814 Y_RNA.360-201ENST00000365512 102 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 RNU6-209P-201ENST00000384118 107 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 MIR548D2-201ENST00000384955 97 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 SNORA40-201ENST00000388090 126 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 RNU6-257P-201ENST00000410238 98 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 RNU6-1211P-201ENST00000459179 105 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 RNU6-863P-201ENST00000515989 104 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 AC025166.1-201ENST00000612411 163 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 MIR6755-201ENST00000619993 66 ntBASIC0.24□□□□□ -2.37
ACTN1P12814 Y_RNA.506-201ENST00000384494 102 ntBASIC0.23□□□□□ -2.37
ACTN1P12814 Y_RNA.568-201ENST00000384742 113 ntBASIC0.23□□□□□ -2.37
ACTN1P12814 RNA5SP476-201ENST00000516613 103 ntBASIC0.23□□□□□ -2.37
ACTN1P12814 RNU6-1212P-201ENST00000517023 104 ntBASIC0.23□□□□□ -2.37
ACTN1P12814 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
ACTN1P12814 AC067863.3-201ENST00000624172 122 ntBASIC0.23□□□□□ -2.37
ACTN1P12814 RNU6-1099P-201ENST00000363533 107 ntBASIC0.22□□□□□ -2.37
ACTN1P12814 SNORD58C-201ENST00000365223 64 ntBASIC0.22□□□□□ -2.37
ACTN1P12814 MIR329-2-201ENST00000385029 84 ntBASIC0.22□□□□□ -2.37
ACTN1P12814 SNORD63B-201ENST00000411005 70 ntBASIC0.22□□□□□ -2.37
ACTN1P12814 RNU7-195P-201ENST00000458793 62 ntBASIC0.22□□□□□ -2.37
ACTN1P12814 RNU6-726P-201ENST00000364680 107 ntBASIC0.21□□□□□ -2.38
ACTN1P12814 RNU6-1126P-201ENST00000384002 107 ntBASIC0.21□□□□□ -2.38
ACTN1P12814 RNU6-907P-201ENST00000390924 102 ntBASIC0.21□□□□□ -2.38
ACTN1P12814 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.21□□□□□ -2.38
ACTN1P12814 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
ACTN1P12814 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.21□□□□□ -2.38
ACTN1P12814 AL512310.12-203ENST00000640543 90 ntBASIC0.21□□□□□ -2.38
ACTN1P12814 MTND5P18-201ENST00000445624 1801 ntBASIC0.21□□□□□ -2.38
ACTN1P12814 RNU6-170P-201ENST00000362832 104 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 MIR760-201ENST00000390220 80 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 MIR548I2-201ENST00000408348 149 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 AC097635.1-201ENST00000450678 155 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 RNU6-772P-201ENST00000516042 105 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 RNU6-971P-201ENST00000516920 106 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 RNU6-850P-201ENST00000516934 103 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 MTND5P40-201ENST00000559945 246 ntBASIC0.2□□□□□ -2.38
ACTN1P12814 RNA5SP403-201ENST00000363598 108 ntBASIC0.19□□□□□ -2.38
ACTN1P12814 Y_RNA.344-201ENST00000365381 112 ntBASIC0.19□□□□□ -2.38
ACTN1P12814 Y_RNA.525-201ENST00000384570 113 ntBASIC0.19□□□□□ -2.38
ACTN1P12814 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.19□□□□□ -2.38
ACTN1P12814 Y_RNA.630-201ENST00000411370 108 ntBASIC0.19□□□□□ -2.38
ACTN1P12814 RNU7-107P-201ENST00000459121 61 ntBASIC0.19□□□□□ -2.38
ACTN1P12814 Y_RNA.809-201ENST00000516058 95 ntBASIC0.19□□□□□ -2.38
ACTN1P12814 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.19□□□□□ -2.38
ACTN1P12814 Y_RNA.155-201ENST00000363632 101 ntBASIC0.18□□□□□ -2.38
ACTN1P12814 RNY1P5-201ENST00000383890 115 ntBASIC0.18□□□□□ -2.38
ACTN1P12814 SNORD38.2-201ENST00000384470 69 ntBASIC0.18□□□□□ -2.38
ACTN1P12814 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
ACTN1P12814 SNORA9.1-201ENST00000362412 131 ntBASIC0.17□□□□□ -2.38
ACTN1P12814 RNU6-571P-201ENST00000384128 107 ntBASIC0.17□□□□□ -2.38
ACTN1P12814 RNU7-106P-201ENST00000459514 67 ntBASIC0.17□□□□□ -2.38
ACTN1P12814 MIR6759-201ENST00000638110 65 ntBASIC0.17□□□□□ -2.38
ACTN1P12814 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
ACTN1P12814 RNU6-774P-201ENST00000363238 107 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 RNY4P6-201ENST00000363667 96 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 RNU6-524P-201ENST00000384270 107 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 MIR516A2-201ENST00000384888 90 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 MIR516A1-201ENST00000385033 90 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 SPINT5P-201ENST00000448174 155 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 HAR1A.1-201ENST00000459583 118 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 RNU6-1232P-201ENST00000516299 86 ntBASIC0.16□□□□□ -2.38
ACTN1P12814 AL157777.2-201ENST00000258070 137 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 RNU6-363P-201ENST00000362895 105 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 RNU6-409P-201ENST00000384114 104 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 MT-TR-201ENST00000387439 65 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 MIR499B-201ENST00000636498 73 ntBASIC0.15□□□□□ -2.39
ACTN1P12814 Y_RNA.247-201ENST00000364500 92 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 Y_RNA.342-201ENST00000365352 113 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 Y_RNA.507-201ENST00000384500 99 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 RNU6-816P-201ENST00000390914 107 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 Y_RNA.586-201ENST00000391146 98 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 RNU6-1268P-201ENST00000391214 107 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 RNU6-1239P-201ENST00000391310 107 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 MIR548I1-201ENST00000408810 149 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 AL353813.1-201ENST00000440700 253 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 RPL39P34-201ENST00000477141 156 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 MIR3133-201ENST00000583157 78 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 RNU1-29P-201ENST00000606574 126 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 SNORA70.25-201ENST00000612741 95 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 MIR6086-201ENST00000638065 55 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
ACTN1P12814 Y_RNA.346-201ENST00000365385 112 ntBASIC0.13□□□□□ -2.39
ACTN1P12814 Y_RNA.362-201ENST00000365518 110 ntBASIC0.13□□□□□ -2.39
ACTN1P12814 MIR539-201ENST00000365690 78 ntBASIC0.13□□□□□ -2.39
ACTN1P12814 MIR643-201ENST00000385267 97 ntBASIC0.13□□□□□ -2.39
ACTN1P12814 RNU6-269P-201ENST00000391077 97 ntBASIC0.13□□□□□ -2.39
ACTN1P12814 MIR4768-201ENST00000585270 74 ntBASIC0.13□□□□□ -2.39
ACTN1P12814 AL162376.1-201ENST00000624117 175 ntBASIC0.13□□□□□ -2.39
ACTN1P12814 RNU6-1313P-201ENST00000362622 102 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 237.8 ms