Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 RNU6-807P-201ENST00000516805 107 ntBASIC1.81□□□□□ -2.12
SRFP11831 RNU1-40P-201ENST00000516816 164 ntBASIC1.81□□□□□ -2.12
SRFP11831 RNU1-97P-201ENST00000516872 164 ntBASIC1.81□□□□□ -2.12
SRFP11831 Y_RNA.340-201ENST00000365330 92 ntBASIC1.8□□□□□ -2.12
SRFP11831 SNORD63B-201ENST00000411005 70 ntBASIC1.8□□□□□ -2.12
SRFP11831 Y_RNA.660-201ENST00000516002 120 ntBASIC1.8□□□□□ -2.12
SRFP11831 Y_RNA.681-201ENST00000516445 113 ntBASIC1.8□□□□□ -2.12
SRFP11831 AP003716.2-201ENST00000528260 108 ntBASIC1.8□□□□□ -2.12
SRFP11831 MIR4491-201ENST00000581087 68 ntBASIC1.8□□□□□ -2.12
SRFP11831 SNORD92-201ENST00000585078 85 ntBASIC1.8□□□□□ -2.12
SRFP11831 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
SRFP11831 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
SRFP11831 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
SRFP11831 RNU4-58P-201ENST00000363192 141 ntBASIC1.79□□□□□ -2.12
SRFP11831 RNU6-654P-201ENST00000364373 107 ntBASIC1.79□□□□□ -2.12
SRFP11831 HMGN2P19-201ENST00000425149 265 ntBASIC1.79□□□□□ -2.12
SRFP11831 AC125388.1-201ENST00000459631 156 ntBASIC1.79□□□□□ -2.12
SRFP11831 MIR6504-201ENST00000613520 61 ntBASIC1.79□□□□□ -2.12
SRFP11831 ZNF209P-201ENST00000593450 2304 ntBASIC1.79□□□□□ -2.12
SRFP11831 MIR302D-201ENST00000362275 68 ntBASIC1.78□□□□□ -2.12
SRFP11831 MIR18B-201ENST00000454574 71 ntBASIC1.78□□□□□ -2.12
SRFP11831 RNU6-539P-201ENST00000516665 103 ntBASIC1.78□□□□□ -2.12
SRFP11831 MIR3664-201ENST00000579074 99 ntBASIC1.78□□□□□ -2.12
SRFP11831 MIR6779-201ENST00000617283 64 ntBASIC1.78□□□□□ -2.12
SRFP11831 AP000553.5-201ENST00000641933 54 ntBASIC1.78□□□□□ -2.12
SRFP11831 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SRFP11831 MIR101-2-201ENST00000362195 79 ntBASIC1.77□□□□□ -2.13
SRFP11831 RNU7-195P-201ENST00000458793 62 ntBASIC1.77□□□□□ -2.13
SRFP11831 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.77□□□□□ -2.13
SRFP11831 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.77□□□□□ -2.13
SRFP11831 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SRFP11831 Y_RNA.12-201ENST00000362393 112 ntBASIC1.76□□□□□ -2.13
SRFP11831 SNORD114-26-201ENST00000363543 72 ntBASIC1.76□□□□□ -2.13
SRFP11831 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
SRFP11831 AC013244.2-201ENST00000603396 103 ntBASIC1.76□□□□□ -2.13
SRFP11831 RMST_2.1-201ENST00000617263 136 ntBASIC1.76□□□□□ -2.13
SRFP11831 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SRFP11831 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SRFP11831 RNU6-580P-201ENST00000365159 107 ntBASIC1.75□□□□□ -2.13
SRFP11831 Y_RNA.327-201ENST00000365201 102 ntBASIC1.75□□□□□ -2.13
SRFP11831 Y_RNA.588-201ENST00000391254 102 ntBASIC1.75□□□□□ -2.13
SRFP11831 SNORD30.1-201ENST00000391309 70 ntBASIC1.75□□□□□ -2.13
SRFP11831 SNORD100-201ENST00000408573 76 ntBASIC1.75□□□□□ -2.13
SRFP11831 Y_RNA.596-201ENST00000410462 109 ntBASIC1.75□□□□□ -2.13
SRFP11831 MIR3198-2-201ENST00000577868 80 ntBASIC1.75□□□□□ -2.13
SRFP11831 MIR4448-201ENST00000584360 86 ntBASIC1.75□□□□□ -2.13
SRFP11831 AC023934.1-201ENST00000574529 2389 ntBASIC1.74□□□□□ -2.13
SRFP11831 Y_RNA.264-201ENST00000364665 102 ntBASIC1.74□□□□□ -2.13
SRFP11831 RNU6-392P-201ENST00000364926 101 ntBASIC1.74□□□□□ -2.13
SRFP11831 RNU1-36P-201ENST00000365130 165 ntBASIC1.74□□□□□ -2.13
SRFP11831 Y_RNA.330-201ENST00000365230 109 ntBASIC1.74□□□□□ -2.13
SRFP11831 Y_RNA.371-201ENST00000365591 113 ntBASIC1.74□□□□□ -2.13
SRFP11831 RNU6-42P-201ENST00000384165 107 ntBASIC1.74□□□□□ -2.13
SRFP11831 Y_RNA.536-201ENST00000384621 113 ntBASIC1.74□□□□□ -2.13
SRFP11831 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
SRFP11831 AL606490.4-201ENST00000423117 127 ntBASIC1.74□□□□□ -2.13
SRFP11831 snoU13.17-201ENST00000458802 104 ntBASIC1.74□□□□□ -2.13
SRFP11831 TRAJ51-201ENST00000504127 63 ntBASIC1.74□□□□□ -2.13
SRFP11831 RNU6-687P-201ENST00000516443 89 ntBASIC1.74□□□□□ -2.13
SRFP11831 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
SRFP11831 MIR1297-201ENST00000637311 77 ntBASIC1.74□□□□□ -2.13
SRFP11831 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.73□□□□□ -2.13
SRFP11831 Y_RNA.178-201ENST00000363832 102 ntBASIC1.73□□□□□ -2.13
SRFP11831 SNORA8.1-201ENST00000384250 140 ntBASIC1.73□□□□□ -2.13
SRFP11831 RNU6-649P-201ENST00000384463 107 ntBASIC1.73□□□□□ -2.13
SRFP11831 MIR154-201ENST00000385243 84 ntBASIC1.73□□□□□ -2.13
SRFP11831 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SRFP11831 snoU13.21-201ENST00000459368 105 ntBASIC1.73□□□□□ -2.13
SRFP11831 RNU6-1194P-201ENST00000516208 104 ntBASIC1.73□□□□□ -2.13
SRFP11831 RNU6-303P-201ENST00000517091 106 ntBASIC1.73□□□□□ -2.13
SRFP11831 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.73□□□□□ -2.13
SRFP11831 AL512310.8-201ENST00000550183 120 ntBASIC1.73□□□□□ -2.13
SRFP11831 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SRFP11831 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
SRFP11831 RNU6-587P-201ENST00000391282 106 ntBASIC1.72□□□□□ -2.13
SRFP11831 RNU6-634P-201ENST00000459134 106 ntBASIC1.72□□□□□ -2.13
SRFP11831 RN7SKP88-201ENST00000516847 250 ntBASIC1.72□□□□□ -2.13
SRFP11831 RNU6-165P-201ENST00000517170 99 ntBASIC1.72□□□□□ -2.13
SRFP11831 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.72□□□□□ -2.13
SRFP11831 7SK.8-201ENST00000612110 250 ntBASIC1.72□□□□□ -2.13
SRFP11831 7SK.11-201ENST00000615477 250 ntBASIC1.72□□□□□ -2.13
SRFP11831 TRDV1-202ENST00000621643 102 ntBASIC1.72□□□□□ -2.13
SRFP11831 7SK.13-201ENST00000622040 250 ntBASIC1.72□□□□□ -2.13
SRFP11831 Y_RNA.13-201ENST00000362403 112 ntBASIC1.71□□□□□ -2.14
SRFP11831 RNU5F-1-201ENST00000362507 117 ntBASIC1.71□□□□□ -2.14
SRFP11831 RNU6-1051P-201ENST00000365471 102 ntBASIC1.71□□□□□ -2.14
SRFP11831 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SRFP11831 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.71□□□□□ -2.14
SRFP11831 MIR1257-201ENST00000408490 117 ntBASIC1.71□□□□□ -2.14
SRFP11831 SNORD83.1-201ENST00000411362 77 ntBASIC1.71□□□□□ -2.14
SRFP11831 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.71□□□□□ -2.14
SRFP11831 RNU6-717P-201ENST00000459076 104 ntBASIC1.71□□□□□ -2.14
SRFP11831 Y_RNA.809-201ENST00000516058 95 ntBASIC1.71□□□□□ -2.14
SRFP11831 MIR4452-201ENST00000583004 71 ntBASIC1.71□□□□□ -2.14
SRFP11831 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.71□□□□□ -2.14
SRFP11831 uc_338.20-201ENST00000621563 178 ntBASIC1.71□□□□□ -2.14
SRFP11831 RNU6-330P-201ENST00000363015 107 ntBASIC1.7□□□□□ -2.14
SRFP11831 Y_RNA.207-201ENST00000364142 106 ntBASIC1.7□□□□□ -2.14
SRFP11831 Y_RNA.239-201ENST00000364444 113 ntBASIC1.7□□□□□ -2.14
SRFP11831 SNORD113.3-201ENST00000364630 78 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms