Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 RNA5SP275-201ENST00000363936 118 ntBASIC-0.56□□□□□ -2.5
HMGB1P09429 RNU6-180P-201ENST00000516697 61 ntBASIC-0.56□□□□□ -2.5
HMGB1P09429 AL670379.3-201ENST00000605040 251 ntBASIC-0.56□□□□□ -2.5
HMGB1P09429 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.56□□□□□ -2.5
HMGB1P09429 AC087741.2-201ENST00000619415 172 ntBASIC-0.56□□□□□ -2.5
HMGB1P09429 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.57□□□□□ -2.5
HMGB1P09429 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.57□□□□□ -2.5
HMGB1P09429 RNU6-46P-201ENST00000383860 107 ntBASIC-0.57□□□□□ -2.5
HMGB1P09429 SNORD38.2-201ENST00000384470 69 ntBASIC-0.57□□□□□ -2.5
HMGB1P09429 AC096531.1-201ENST00000419107 107 ntBASIC-0.57□□□□□ -2.5
HMGB1P09429 RNU6-521P-201ENST00000516663 105 ntBASIC-0.57□□□□□ -2.5
HMGB1P09429 MTND5P40-201ENST00000559945 246 ntBASIC-0.57□□□□□ -2.5
HMGB1P09429 RNU6-151P-201ENST00000364158 107 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 MIR516B1-201ENST00000385211 90 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 MIR759-201ENST00000390224 91 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 RNU6-460P-201ENST00000391158 108 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 MIR3163-201ENST00000581592 73 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 MIR6779-201ENST00000617283 64 ntBASIC-0.58□□□□□ -2.5
HMGB1P09429 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.59□□□□□ -2.5
HMGB1P09429 SNORA25.13-201ENST00000516395 103 ntBASIC-0.59□□□□□ -2.5
HMGB1P09429 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.59□□□□□ -2.5
HMGB1P09429 MIR3666-201ENST00000607845 111 ntBASIC-0.59□□□□□ -2.5
HMGB1P09429 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.6□□□□□ -2.51
HMGB1P09429 RNU6-915P-201ENST00000364943 103 ntBASIC-0.6□□□□□ -2.51
HMGB1P09429 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.6□□□□□ -2.51
HMGB1P09429 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.61□□□□□ -2.51
HMGB1P09429 MIR516A2-201ENST00000384888 90 ntBASIC-0.61□□□□□ -2.51
HMGB1P09429 MIR516A1-201ENST00000385033 90 ntBASIC-0.61□□□□□ -2.51
HMGB1P09429 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.61□□□□□ -2.51
HMGB1P09429 MIR3121-201ENST00000579680 77 ntBASIC-0.61□□□□□ -2.51
HMGB1P09429 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.61□□□□□ -2.51
HMGB1P09429 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.62□□□□□ -2.51
HMGB1P09429 RNA5SP300-201ENST00000391197 107 ntBASIC-0.62□□□□□ -2.51
HMGB1P09429 RNU7-120P-201ENST00000459334 63 ntBASIC-0.62□□□□□ -2.51
HMGB1P09429 CR383656.4-201ENST00000546909 122 ntBASIC-0.62□□□□□ -2.51
HMGB1P09429 SNORD114-28-201ENST00000363610 72 ntBASIC-0.63□□□□□ -2.51
HMGB1P09429 RNU1-141P-201ENST00000364623 158 ntBASIC-0.63□□□□□ -2.51
HMGB1P09429 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.63□□□□□ -2.51
HMGB1P09429 SNORD14C-201ENST00000365382 88 ntBASIC-0.63□□□□□ -2.51
HMGB1P09429 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.63□□□□□ -2.51
HMGB1P09429 SNORD114-31-201ENST00000363219 75 ntBASIC-0.64□□□□□ -2.51
HMGB1P09429 MT-TI-201ENST00000387365 69 ntBASIC-0.64□□□□□ -2.51
HMGB1P09429 MIR513C-201ENST00000401352 84 ntBASIC-0.64□□□□□ -2.51
HMGB1P09429 SNORD126-201ENST00000459475 77 ntBASIC-0.64□□□□□ -2.51
HMGB1P09429 MIR4645-201ENST00000583158 77 ntBASIC-0.64□□□□□ -2.51
HMGB1P09429 MIR4473-201ENST00000583731 91 ntBASIC-0.64□□□□□ -2.51
HMGB1P09429 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.65□□□□□ -2.51
HMGB1P09429 RNU6-682P-201ENST00000363843 106 ntBASIC-0.65□□□□□ -2.51
HMGB1P09429 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.65□□□□□ -2.51
HMGB1P09429 RNU6-200P-201ENST00000364743 107 ntBASIC-0.65□□□□□ -2.51
HMGB1P09429 RNU6-138P-201ENST00000515952 107 ntBASIC-0.65□□□□□ -2.51
HMGB1P09429 IGKV1-22-201ENST00000524313 326 ntBASIC-0.65□□□□□ -2.51
HMGB1P09429 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.65□□□□□ -2.51
HMGB1P09429 SNORD115-19-201ENST00000363098 82 ntBASIC-0.66□□□□□ -2.52
HMGB1P09429 SNORD115-18-201ENST00000363293 82 ntBASIC-0.66□□□□□ -2.52
HMGB1P09429 RNU6-379P-201ENST00000363813 104 ntBASIC-0.66□□□□□ -2.52
HMGB1P09429 SNORD115-17-201ENST00000364612 82 ntBASIC-0.66□□□□□ -2.52
HMGB1P09429 RNU6-388P-201ENST00000517012 105 ntBASIC-0.66□□□□□ -2.52
HMGB1P09429 RNU6-389P-201ENST00000517048 105 ntBASIC-0.66□□□□□ -2.52
HMGB1P09429 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.66□□□□□ -2.52
HMGB1P09429 SNORD49B-201ENST00000365172 72 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 SNORA32.3-201ENST00000384772 121 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 MIR329-2-201ENST00000385029 84 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 MIR1263-201ENST00000408324 86 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 RNU7-197P-201ENST00000458836 62 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 IGLVI-20-201ENST00000519296 130 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 MIR8064-201ENST00000612863 90 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 MIR1255B1-201ENST00000636325 63 ntBASIC-0.67□□□□□ -2.52
HMGB1P09429 MIR876-201ENST00000401147 81 ntBASIC-0.68□□□□□ -2.52
HMGB1P09429 SNORA7.5-201ENST00000410672 110 ntBASIC-0.68□□□□□ -2.52
HMGB1P09429 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.69□□□□□ -2.52
HMGB1P09429 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.69□□□□□ -2.52
HMGB1P09429 SNORD115-44-201ENST00000365391 82 ntBASIC-0.69□□□□□ -2.52
HMGB1P09429 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.69□□□□□ -2.52
HMGB1P09429 RN7SKP19-201ENST00000516016 252 ntBASIC-0.69□□□□□ -2.52
HMGB1P09429 AL162726.3-218ENST00000636401 95 ntBASIC-0.69□□□□□ -2.52
HMGB1P09429 AL512310.12-203ENST00000640543 90 ntBASIC-0.69□□□□□ -2.52
HMGB1P09429 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.7□□□□□ -2.52
HMGB1P09429 SPINT5P-201ENST00000448174 155 ntBASIC-0.7□□□□□ -2.52
HMGB1P09429 AC074198.2-201ENST00000508153 258 ntBASIC-0.7□□□□□ -2.52
HMGB1P09429 uc_338.36-201ENST00000622331 158 ntBASIC-0.7□□□□□ -2.52
HMGB1P09429 MIR4788-201ENST00000639104 80 ntBASIC-0.7□□□□□ -2.52
HMGB1P09429 MIR148A-201ENST00000362215 68 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 SNORD116-18-201ENST00000383961 92 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 MIR617-201ENST00000385030 97 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 MIR519E-201ENST00000385075 84 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 YWHAEP2-201ENST00000580066 112 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 MIR4263-201ENST00000584745 83 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 MIR4719-201ENST00000585233 84 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 MIR548AZ-201ENST00000616567 95 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 FTX_2.1-201ENST00000618816 94 ntBASIC-0.71□□□□□ -2.52
HMGB1P09429 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.72□□□□□ -2.52
HMGB1P09429 RNU6-647P-201ENST00000364243 107 ntBASIC-0.72□□□□□ -2.52
HMGB1P09429 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.72□□□□□ -2.52
HMGB1P09429 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.72□□□□□ -2.52
HMGB1P09429 MIR196A2-201ENST00000385189 110 ntBASIC-0.72□□□□□ -2.52
HMGB1P09429 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms