Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 RNU6-521P-201ENST00000516663 105 ntBASIC-0.23□□□□□ -2.45
VIMP08670 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.23□□□□□ -2.45
VIMP08670 RNU6-850P-201ENST00000516934 103 ntBASIC-0.23□□□□□ -2.45
VIMP08670 AC004792.1-201ENST00000614523 137 ntBASIC-0.23□□□□□ -2.45
VIMP08670 SNORD115-19-201ENST00000363098 82 ntBASIC-0.24□□□□□ -2.45
VIMP08670 SNORD115-18-201ENST00000363293 82 ntBASIC-0.24□□□□□ -2.45
VIMP08670 SNORD115-17-201ENST00000364612 82 ntBASIC-0.24□□□□□ -2.45
VIMP08670 MIR513C-201ENST00000401352 84 ntBASIC-0.24□□□□□ -2.45
VIMP08670 HMGN2P22-201ENST00000427588 175 ntBASIC-0.24□□□□□ -2.45
VIMP08670 RNU7-165P-201ENST00000458864 60 ntBASIC-0.24□□□□□ -2.45
VIMP08670 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.24□□□□□ -2.45
VIMP08670 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.25□□□□□ -2.45
VIMP08670 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.25□□□□□ -2.45
VIMP08670 MIR1273G-201ENST00000577677 100 ntBASIC-0.25□□□□□ -2.45
VIMP08670 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.26□□□□□ -2.45
VIMP08670 SNORD116-18-201ENST00000383961 92 ntBASIC-0.26□□□□□ -2.45
VIMP08670 RN7SKP19-201ENST00000516016 252 ntBASIC-0.26□□□□□ -2.45
VIMP08670 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.27□□□□□ -2.45
VIMP08670 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.27□□□□□ -2.45
VIMP08670 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.27□□□□□ -2.45
VIMP08670 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.27□□□□□ -2.45
VIMP08670 MIR516A2-201ENST00000384888 90 ntBASIC-0.27□□□□□ -2.45
VIMP08670 MIR516A1-201ENST00000385033 90 ntBASIC-0.27□□□□□ -2.45
VIMP08670 MIR214-201ENST00000385214 110 ntBASIC-0.27□□□□□ -2.45
VIMP08670 MIR613-201ENST00000385248 95 ntBASIC-0.27□□□□□ -2.45
VIMP08670 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.27□□□□□ -2.45
VIMP08670 RNU7-74P-201ENST00000459104 62 ntBASIC-0.27□□□□□ -2.45
VIMP08670 MTND5P40-201ENST00000559945 246 ntBASIC-0.27□□□□□ -2.45
VIMP08670 AL670379.3-201ENST00000605040 251 ntBASIC-0.27□□□□□ -2.45
VIMP08670 MIR1255B1-201ENST00000636325 63 ntBASIC-0.27□□□□□ -2.45
VIMP08670 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.28□□□□□ -2.45
VIMP08670 SNORD38.2-201ENST00000384470 69 ntBASIC-0.28□□□□□ -2.45
VIMP08670 MIR759-201ENST00000390224 91 ntBASIC-0.28□□□□□ -2.45
VIMP08670 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
VIMP08670 MIR1263-201ENST00000408324 86 ntBASIC-0.28□□□□□ -2.45
VIMP08670 RNU6-394P-201ENST00000410735 107 ntBASIC-0.28□□□□□ -2.45
VIMP08670 SNORD4A-201ENST00000459174 72 ntBASIC-0.28□□□□□ -2.45
VIMP08670 AP001328.1-201ENST00000528550 176 ntBASIC-0.28□□□□□ -2.45
VIMP08670 MIR8087-201ENST00000612745 78 ntBASIC-0.28□□□□□ -2.45
VIMP08670 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
VIMP08670 RNU6-647P-201ENST00000364243 107 ntBASIC-0.29□□□□□ -2.46
VIMP08670 SNORD114-12-201ENST00000365400 75 ntBASIC-0.29□□□□□ -2.46
VIMP08670 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.29□□□□□ -2.46
VIMP08670 RNU6-180P-201ENST00000516697 61 ntBASIC-0.29□□□□□ -2.46
VIMP08670 PVT1_3.1-201ENST00000620853 95 ntBASIC-0.29□□□□□ -2.46
VIMP08670 MIR6514-201ENST00000622549 70 ntBASIC-0.29□□□□□ -2.46
VIMP08670 Y_RNA.257-201ENST00000364596 102 ntBASIC-0.3□□□□□ -2.46
VIMP08670 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
VIMP08670 AC084368.1-201ENST00000620935 65 ntBASIC-0.3□□□□□ -2.46
VIMP08670 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.3□□□□□ -2.46
VIMP08670 AP001340.1-201ENST00000624405 217 ntBASIC-0.3□□□□□ -2.46
VIMP08670 RNU1-141P-201ENST00000364623 158 ntBASIC-0.31□□□□□ -2.46
VIMP08670 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
VIMP08670 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.31□□□□□ -2.46
VIMP08670 RNU6-735P-201ENST00000410612 107 ntBASIC-0.31□□□□□ -2.46
VIMP08670 RNA5SP136-201ENST00000410906 107 ntBASIC-0.31□□□□□ -2.46
VIMP08670 SNORA25.13-201ENST00000516395 103 ntBASIC-0.31□□□□□ -2.46
VIMP08670 MIR548X2-201ENST00000579776 100 ntBASIC-0.31□□□□□ -2.46
VIMP08670 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.32□□□□□ -2.46
VIMP08670 RNU6-804P-201ENST00000384286 107 ntBASIC-0.32□□□□□ -2.46
VIMP08670 SNORA7.5-201ENST00000410672 110 ntBASIC-0.32□□□□□ -2.46
VIMP08670 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.32□□□□□ -2.46
VIMP08670 MIR548AG2-201ENST00000581228 64 ntBASIC-0.32□□□□□ -2.46
VIMP08670 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.32□□□□□ -2.46
VIMP08670 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.32□□□□□ -2.46
VIMP08670 RNA5SP275-201ENST00000363936 118 ntBASIC-0.33□□□□□ -2.46
VIMP08670 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.33□□□□□ -2.46
VIMP08670 MIR516B1-201ENST00000385211 90 ntBASIC-0.33□□□□□ -2.46
VIMP08670 MIR1197-201ENST00000408818 88 ntBASIC-0.33□□□□□ -2.46
VIMP08670 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
VIMP08670 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.34□□□□□ -2.46
VIMP08670 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.34□□□□□ -2.46
VIMP08670 SNORD115-44-201ENST00000365391 82 ntBASIC-0.34□□□□□ -2.46
VIMP08670 Y_RNA.355-201ENST00000365462 98 ntBASIC-0.34□□□□□ -2.46
VIMP08670 MIR548D2-201ENST00000384955 97 ntBASIC-0.34□□□□□ -2.46
VIMP08670 MIR519E-201ENST00000385075 84 ntBASIC-0.34□□□□□ -2.46
VIMP08670 MIR876-201ENST00000401147 81 ntBASIC-0.34□□□□□ -2.46
VIMP08670 AC096531.1-201ENST00000419107 107 ntBASIC-0.34□□□□□ -2.46
VIMP08670 CR383656.4-201ENST00000546909 122 ntBASIC-0.34□□□□□ -2.46
VIMP08670 MIR3144-201ENST00000579460 79 ntBASIC-0.34□□□□□ -2.46
VIMP08670 AL512310.12-203ENST00000640543 90 ntBASIC-0.34□□□□□ -2.46
VIMP08670 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.35□□□□□ -2.47
VIMP08670 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.35□□□□□ -2.47
VIMP08670 MIR617-201ENST00000385030 97 ntBASIC-0.35□□□□□ -2.47
VIMP08670 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.35□□□□□ -2.47
VIMP08670 AL158147.1-201ENST00000443970 75 ntBASIC-0.35□□□□□ -2.47
VIMP08670 SPINT5P-201ENST00000448174 155 ntBASIC-0.35□□□□□ -2.47
VIMP08670 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.36□□□□□ -2.47
VIMP08670 RNU6-781P-201ENST00000516377 101 ntBASIC-0.36□□□□□ -2.47
VIMP08670 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.36□□□□□ -2.47
VIMP08670 RNU6-182P-201ENST00000516970 105 ntBASIC-0.36□□□□□ -2.47
VIMP08670 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.36□□□□□ -2.47
VIMP08670 IGLVI-20-201ENST00000519296 130 ntBASIC-0.36□□□□□ -2.47
VIMP08670 MIR4645-201ENST00000583158 77 ntBASIC-0.36□□□□□ -2.47
VIMP08670 MIR4473-201ENST00000583731 91 ntBASIC-0.36□□□□□ -2.47
VIMP08670 MIR3666-201ENST00000607845 111 ntBASIC-0.36□□□□□ -2.47
VIMP08670 MIR8064-201ENST00000612863 90 ntBASIC-0.36□□□□□ -2.47
VIMP08670 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.37□□□□□ -2.47
VIMP08670 SNORD114-31-201ENST00000363219 75 ntBASIC-0.37□□□□□ -2.47
VIMP08670 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms