Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SNORA2B-201ENST00000384583 137 ntBASIC1□□□□□ -2.25
COL2A1P02458 MIR889-201ENST00000401280 79 ntBASIC1□□□□□ -2.25
COL2A1P02458 SNORA25.16-201ENST00000516741 121 ntBASIC1□□□□□ -2.25
COL2A1P02458 AC138749.4-201ENST00000563970 127 ntBASIC1□□□□□ -2.25
COL2A1P02458 RNU6-403P-201ENST00000363163 104 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 Y_RNA.119-201ENST00000363301 96 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU4-32P-201ENST00000363404 141 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU6-1244P-201ENST00000363614 108 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 SNORD1A-201ENST00000364968 72 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU6-396P-201ENST00000365369 105 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU6-35P-201ENST00000384530 107 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 MIR1185-1-201ENST00000408598 86 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNA5SP193-201ENST00000410353 107 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 MIR8074-201ENST00000615081 81 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 Y_RNA.244-201ENST00000364484 109 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU6-675P-201ENST00000384236 104 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 AL161932.1-201ENST00000437408 146 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU7-62P-201ENST00000458856 62 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU6-638P-201ENST00000516582 104 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 RNU6-531P-201ENST00000516694 104 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 MIR4711-201ENST00000578274 70 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 MIR2909-201ENST00000617113 69 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 AP001362.1-201ENST00000625165 124 ntBASIC0.99□□□□□ -2.25
COL2A1P02458 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC0.99□□□□□ -2.25
COL2A1P02458 MIR30D-201ENST00000362283 70 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 RNU6-509P-201ENST00000363519 107 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 Y_RNA.173-201ENST00000363776 113 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 SNORD116-10-201ENST00000363791 102 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 RNU6-949P-201ENST00000384040 107 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 SNORA72.6-201ENST00000384520 129 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 MIR516A2-201ENST00000384888 90 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 MIR516A1-201ENST00000385033 90 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 SNORD93-201ENST00000408813 74 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 RNU6-1165P-201ENST00000410119 107 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 SNORD83.1-201ENST00000411362 77 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 Y_RNA.685-201ENST00000516532 108 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 AC015688.6-201ENST00000577737 104 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 MIR4491-201ENST00000581087 68 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 GHRLOS.1-201ENST00000610995 70 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 AC006160.2-201ENST00000637708 154 ntBASIC0.98□□□□□ -2.25
COL2A1P02458 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
COL2A1P02458 MIR103A2-201ENST00000362154 78 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 Y_RNA.221-201ENST00000364248 96 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 snoU13.9-201ENST00000458927 103 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 snoU13.11-201ENST00000459219 104 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 AC048334.1-201ENST00000477975 159 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 RNU6-850P-201ENST00000516934 103 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.97□□□□□ -2.25
COL2A1P02458 MIR3937-201ENST00000580135 106 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 MIR4713-201ENST00000582691 75 ntBASIC0.97□□□□□ -2.25
COL2A1P02458 AC023934.1-201ENST00000574529 2389 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 Y_RNA.57-201ENST00000362806 113 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 RNY1P2-201ENST00000364820 117 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 MIR1197-201ENST00000408818 88 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 AL133373.1-201ENST00000497098 94 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 AC023827.1-201ENST00000569247 97 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 AC013244.2-201ENST00000603396 103 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 AP000753.3-201ENST00000604083 169 ntBASIC0.96□□□□□ -2.26
COL2A1P02458 RNU6-633P-201ENST00000362612 103 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 RNA5SP264-201ENST00000363115 107 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 Y_RNA.168-201ENST00000363740 102 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 SNORD38.2-201ENST00000384470 69 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
COL2A1P02458 RNU6-519P-201ENST00000410590 108 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 RNU7-171P-201ENST00000459581 62 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 AC079140.2-201ENST00000506193 142 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 MIR4439-201ENST00000583746 80 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 MIR8066-201ENST00000617280 78 ntBASIC0.95□□□□□ -2.26
COL2A1P02458 Y_RNA.96-201ENST00000363092 109 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
COL2A1P02458 Y_RNA.426-201ENST00000384068 113 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-480P-201ENST00000384332 107 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-447P-201ENST00000410293 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-1118P-201ENST00000410382 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-1076P-201ENST00000410397 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-355P-201ENST00000410427 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-791P-201ENST00000410467 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-705P-201ENST00000410601 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-1100P-201ENST00000410691 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-860P-201ENST00000410860 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-1217P-201ENST00000411276 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-785P-201ENST00000411324 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNU6-165P-201ENST00000517170 99 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 U6.90-201ENST00000614007 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 U6.70-201ENST00000620287 104 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 MIR6086-201ENST00000638065 55 ntBASIC0.94□□□□□ -2.26
COL2A1P02458 RNA5SP48-201ENST00000363969 126 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 MIR519C-201ENST00000385053 87 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 RNU7-85P-201ENST00000458851 63 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 RNU6-857P-201ENST00000515893 110 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 MIR3198-2-201ENST00000577868 80 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 MIR4666B-201ENST00000578142 81 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 AL357312.1-201ENST00000603879 298 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
COL2A1P02458 MIR3202-2-201ENST00000635980 79 ntBASIC0.93□□□□□ -2.26
COL2A1P02458 MIR26B-201ENST00000362251 77 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 313.9 ms