Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 Y_RNA.56-201ENST00000362798 112 ntBASIC0.54□□□□□ -2.32
CLPTM1O96005 Y_RNA.174-201ENST00000363781 105 ntBASIC0.54□□□□□ -2.32
CLPTM1O96005 U8.6-201ENST00000364939 135 ntBASIC0.54□□□□□ -2.32
CLPTM1O96005 RNU6-1201P-201ENST00000384227 107 ntBASIC0.54□□□□□ -2.32
CLPTM1O96005 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 RNU4-45P-201ENST00000365469 141 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 Y_RNA.567-201ENST00000384736 106 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 SNRPGP12-201ENST00000449481 213 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 AL157398.1-201ENST00000452981 186 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 TRAJ51-201ENST00000504127 63 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 RNA5SP94-201ENST00000516917 108 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 MTND5P40-201ENST00000559945 246 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 MIR548H5-201ENST00000580314 60 ntBASIC0.53□□□□□ -2.32
CLPTM1O96005 Y_RNA.281-201ENST00000364774 94 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 SNORD38.2-201ENST00000384470 69 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 MIR577-201ENST00000385196 96 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 SPINT5P-201ENST00000448174 155 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 RNU6-1018P-201ENST00000516577 106 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 RNU6-850P-201ENST00000516934 103 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 MIR5009-201ENST00000578736 100 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 AL442128.1-201ENST00000615151 90 ntBASIC0.52□□□□□ -2.33
CLPTM1O96005 Y_RNA.49-201ENST00000362714 112 ntBASIC0.51□□□□□ -2.33
CLPTM1O96005 SNORD38.1-201ENST00000363863 68 ntBASIC0.51□□□□□ -2.33
CLPTM1O96005 RNU6-1107P-201ENST00000364817 104 ntBASIC0.51□□□□□ -2.33
CLPTM1O96005 RNU6-1056P-201ENST00000383996 107 ntBASIC0.51□□□□□ -2.33
CLPTM1O96005 MIR635-201ENST00000384830 98 ntBASIC0.51□□□□□ -2.33
CLPTM1O96005 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.51□□□□□ -2.33
CLPTM1O96005 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.51□□□□□ -2.33
CLPTM1O96005 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.51□□□□□ -2.33
CLPTM1O96005 RNU6-170P-201ENST00000362832 104 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 RNU6-571P-201ENST00000384128 107 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 MIR548G-201ENST00000408442 89 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 SNORD63B-201ENST00000411005 70 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 AC138869.1-201ENST00000568623 124 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 MIR4694-201ENST00000578534 80 ntBASIC0.5□□□□□ -2.33
CLPTM1O96005 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CLPTM1O96005 RNU6-832P-201ENST00000363319 107 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 SNORD115-24-201ENST00000363528 82 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 SNORD114-23-201ENST00000363536 72 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 RNU6-1229P-201ENST00000364295 107 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 RNA5SP517-201ENST00000364724 117 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 RNU6-1014P-201ENST00000383940 103 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 MIR548I2-201ENST00000408348 149 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 RNU7-195P-201ENST00000458793 62 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 RNU6-412P-201ENST00000516434 106 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 MIR3613-201ENST00000579844 87 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 RNU7-10P-201ENST00000607194 63 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 AC092634.7-201ENST00000621022 103 ntBASIC0.49□□□□□ -2.33
CLPTM1O96005 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.49□□□□□ -2.33
CLPTM1O96005 RNU6-834P-201ENST00000362367 110 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 RNY3P2-201ENST00000362918 102 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 Y_RNA.323-201ENST00000365157 109 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 RNU6-1081P-201ENST00000384537 107 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 SNORD28-201ENST00000384706 75 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 MIR599-201ENST00000385069 95 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 AC244505.6-201ENST00000452829 130 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 AC141557.1-201ENST00000540982 400 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 AC244669.1-204ENST00000621564 178 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
CLPTM1O96005 RNU6-1099P-201ENST00000363533 107 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 Y_RNA.273-201ENST00000364703 102 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 Y_RNA.342-201ENST00000365352 113 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 Y_RNA.377-201ENST00000365644 108 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 SNORA8.2-201ENST00000384372 139 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 MIR516A2-201ENST00000384888 90 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 MIR516A1-201ENST00000385033 90 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 SNORA19.1-201ENST00000410656 129 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 AC097635.1-201ENST00000450678 155 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 RNU7-106P-201ENST00000459514 67 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 Y_RNA.659-201ENST00000515994 113 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 RNU6-589P-201ENST00000516485 107 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 RNU6-135P-201ENST00000516769 101 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 MIR4639-201ENST00000584938 69 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 RNU6-90P-201ENST00000606352 106 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.47□□□□□ -2.33
CLPTM1O96005 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 Y_RNA.57-201ENST00000362806 113 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 RNU6-1290P-201ENST00000362957 109 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 Y_RNA.221-201ENST00000364248 96 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.46□□□□□ -2.34
CLPTM1O96005 RNU6-229P-201ENST00000516614 102 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 RNA5SP47-201ENST00000517230 109 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 AC096720.1-201ENST00000604441 183 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 uc_338.28-201ENST00000612082 187 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 AC091304.10-201ENST00000641554 121 ntBASIC0.46□□□□□ -2.34
CLPTM1O96005 Y_RNA.173-201ENST00000363776 113 ntBASIC0.45□□□□□ -2.34
CLPTM1O96005 RNU7-104P-201ENST00000459398 79 ntBASIC0.45□□□□□ -2.34
CLPTM1O96005 Y_RNA.809-201ENST00000516058 95 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 697.6 ms