Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 Y_RNA.495-201ENST00000384435 112 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 SNORD63B-201ENST00000411005 70 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 TRAJ51-201ENST00000504127 63 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 AC138907.6-201ENST00000568401 126 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 AC138869.1-201ENST00000568623 124 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 MIR4777-201ENST00000583710 86 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 SNORD114-21-201ENST00000606412 72 ntBASIC0.98□□□□□ -2.25
KDM1AO60341 Y_RNA.96-201ENST00000363092 109 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 RNU6-1125P-201ENST00000363601 107 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 Y_RNA.467-201ENST00000384297 102 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 RNU6-480P-201ENST00000384332 107 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 MIR519A1-201ENST00000385257 85 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 AC097635.1-201ENST00000450678 155 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 MIR548Z-201ENST00000584743 97 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 RNU6-86P-201ENST00000606534 107 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
KDM1AO60341 RNA5SP245-201ENST00000364239 121 ntBASIC0.96□□□□□ -2.26
KDM1AO60341 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
KDM1AO60341 RNU4-45P-201ENST00000365469 141 ntBASIC0.96□□□□□ -2.26
KDM1AO60341 RNU6-813P-201ENST00000384691 107 ntBASIC0.96□□□□□ -2.26
KDM1AO60341 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.96□□□□□ -2.26
KDM1AO60341 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
KDM1AO60341 Y_RNA.4-201ENST00000362333 112 ntBASIC0.95□□□□□ -2.26
KDM1AO60341 RNU6-469P-201ENST00000516253 101 ntBASIC0.95□□□□□ -2.26
KDM1AO60341 RNU6-135P-201ENST00000516769 101 ntBASIC0.95□□□□□ -2.26
KDM1AO60341 Y_RNA.705-201ENST00000516862 110 ntBASIC0.95□□□□□ -2.26
KDM1AO60341 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.95□□□□□ -2.26
KDM1AO60341 AP001318.4-201ENST00000616637 121 ntBASIC0.95□□□□□ -2.26
KDM1AO60341 MIR516A2-201ENST00000384888 90 ntBASIC0.94□□□□□ -2.26
KDM1AO60341 MIR516A1-201ENST00000385033 90 ntBASIC0.94□□□□□ -2.26
KDM1AO60341 AC244505.6-201ENST00000452829 130 ntBASIC0.94□□□□□ -2.26
KDM1AO60341 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
KDM1AO60341 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.94□□□□□ -2.26
KDM1AO60341 MIR18A-201ENST00000362310 71 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 RNU6-1254P-201ENST00000391266 104 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 RNA5SP222-201ENST00000411039 105 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 RNU7-195P-201ENST00000458793 62 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 RNU6-168P-201ENST00000516189 101 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 RNA5SP102-201ENST00000516865 106 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 AC103810.7-201ENST00000607821 91 ntBASIC0.93□□□□□ -2.26
KDM1AO60341 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
KDM1AO60341 MIR181B2-201ENST00000385004 89 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 MIR599-201ENST00000385069 95 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 MIR644A-201ENST00000385262 94 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 RNU6-972P-201ENST00000391208 107 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 MTATP8P2-201ENST00000435212 202 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 RNU7-106P-201ENST00000459514 67 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 Y_RNA.809-201ENST00000516058 95 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 SNORA40.13-201ENST00000516379 120 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 AC211469.2-201ENST00000605461 205 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 MIR2052-201ENST00000636055 55 ntBASIC0.92□□□□□ -2.26
KDM1AO60341 Y_RNA.164-201ENST00000363709 102 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 SNORA25.9-201ENST00000365087 128 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 Y_RNA.348-201ENST00000365403 103 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 RNU6-644P-201ENST00000391155 98 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 RNU6-887P-201ENST00000410660 100 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 RNU7-61P-201ENST00000515897 61 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 Y_RNA.676-201ENST00000516393 96 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 Y_RNA.677-201ENST00000516401 85 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 MIR3678-201ENST00000578455 94 ntBASIC0.91□□□□□ -2.26
KDM1AO60341 RNU6-1260P-201ENST00000362944 107 ntBASIC0.9□□□□□ -2.27
KDM1AO60341 RNU6-243P-201ENST00000391140 107 ntBASIC0.9□□□□□ -2.27
KDM1AO60341 RNA5SP89-201ENST00000410300 108 ntBASIC0.9□□□□□ -2.27
KDM1AO60341 MTATP6P29-201ENST00000415057 132 ntBASIC0.9□□□□□ -2.27
KDM1AO60341 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
KDM1AO60341 MIR6504-201ENST00000613520 61 ntBASIC0.89□□□□□ -2.27
KDM1AO60341 MIR8070-201ENST00000616510 88 ntBASIC0.89□□□□□ -2.27
KDM1AO60341 AC025521.1-201ENST00000621624 286 ntBASIC0.89□□□□□ -2.27
KDM1AO60341 SNORD36A-201ENST00000362874 73 ntBASIC0.88□□□□□ -2.27
KDM1AO60341 SNORD18A-201ENST00000363753 72 ntBASIC0.88□□□□□ -2.27
KDM1AO60341 RNU6-1229P-201ENST00000364295 107 ntBASIC0.88□□□□□ -2.27
KDM1AO60341 RNU6-110P-201ENST00000384508 104 ntBASIC0.88□□□□□ -2.27
KDM1AO60341 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
KDM1AO60341 AL513043.2-201ENST00000573941 143 ntBASIC0.88□□□□□ -2.27
KDM1AO60341 MIR4639-201ENST00000584938 69 ntBASIC0.88□□□□□ -2.27
KDM1AO60341 SNORD115-24-201ENST00000363528 82 ntBASIC0.87□□□□□ -2.27
KDM1AO60341 RNU6-640P-201ENST00000363693 105 ntBASIC0.87□□□□□ -2.27
KDM1AO60341 MIR1276-201ENST00000408707 83 ntBASIC0.87□□□□□ -2.27
KDM1AO60341 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.87□□□□□ -2.27
KDM1AO60341 SNORA36.2-201ENST00000384004 127 ntBASIC0.86□□□□□ -2.27
KDM1AO60341 RNU6-905P-201ENST00000384434 107 ntBASIC0.86□□□□□ -2.27
KDM1AO60341 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.86□□□□□ -2.27
KDM1AO60341 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 RNY1P8-201ENST00000383970 114 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 RNU6-524P-201ENST00000384270 107 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 SNORD28-201ENST00000384706 75 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 MIR499A-201ENST00000384903 122 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 MIR140-201ENST00000385282 100 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 AL606490.4-201ENST00000423117 127 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.85□□□□□ -2.27
KDM1AO60341 U7.3-201ENST00000616123 62 ntBASIC0.85□□□□□ -2.27
KDM1AO60341 SNORD114-27-201ENST00000363766 70 ntBASIC0.84□□□□□ -2.27
KDM1AO60341 SNORD116-10-201ENST00000363791 102 ntBASIC0.84□□□□□ -2.27
KDM1AO60341 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.84□□□□□ -2.27
KDM1AO60341 Y_RNA.648-201ENST00000459455 110 ntBASIC0.84□□□□□ -2.27
KDM1AO60341 RNA5SP94-201ENST00000516917 108 ntBASIC0.84□□□□□ -2.27
KDM1AO60341 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.84□□□□□ -2.27
KDM1AO60341 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 235.2 ms