Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 AC138393.2-201ENST00000414742 246 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 RNU7-164P-201ENST00000459221 62 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.05□□□□□ -2.74
HMGB3O15347 Y_RNA.688-201ENST00000516565 95 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.05□□□□□ -2.74
HMGB3O15347 MIR4696-201ENST00000581431 70 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 MIR4520-1-201ENST00000582609 70 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 AC021443.1-201ENST00000604478 211 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 AC113139.1-201ENST00000605049 239 ntBASIC-2.05□□□□□ -2.74
HMGB3O15347 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.06□□□□□ -2.74
HMGB3O15347 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.06□□□□□ -2.74
HMGB3O15347 RNU7-123P-201ENST00000515911 60 ntBASIC-2.06□□□□□ -2.74
HMGB3O15347 AC138907.4-201ENST00000570107 226 ntBASIC-2.06□□□□□ -2.74
HMGB3O15347 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-2.06□□□□□ -2.74
HMGB3O15347 RNU6-664P-201ENST00000362381 107 ntBASIC-2.07□□□□□ -2.74
HMGB3O15347 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.07□□□□□ -2.74
HMGB3O15347 SNORD101-201ENST00000384027 73 ntBASIC-2.07□□□□□ -2.74
HMGB3O15347 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.07□□□□□ -2.74
HMGB3O15347 SNORD38.2-201ENST00000384470 69 ntBASIC-2.07□□□□□ -2.74
HMGB3O15347 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.07□□□□□ -2.74
HMGB3O15347 AC073869.6-201ENST00000640656 341 ntBASIC-2.07□□□□□ -2.74
HMGB3O15347 RNU6-235P-201ENST00000362644 107 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 Y_RNA.154-201ENST00000363624 102 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 SNORD116-29-201ENST00000384516 83 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 MIR1277-201ENST00000408536 78 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 MIR1468-201ENST00000410600 86 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 RNU7-134P-201ENST00000458997 64 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.08□□□□□ -2.74
HMGB3O15347 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 SNORA63.7-201ENST00000365579 123 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 SNORD116-6-201ENST00000384711 96 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 RNY4P36-201ENST00000391116 96 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 RNU6-121P-201ENST00000410525 99 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 RNU6-240P-201ENST00000516098 97 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.09□□□□□ -2.74
HMGB3O15347 MTND4LP32-201ENST00000636111 270 ntBASIC-2.09□□□□□ -2.74
HMGB3O15347 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 Y_RNA.275-201ENST00000364726 110 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 MIR29B1-201ENST00000385015 81 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 MIR527-201ENST00000385244 85 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 MIR889-201ENST00000401280 79 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 RNU6-935P-201ENST00000410371 100 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 AC092794.1-201ENST00000612734 582 ntBASIC-2.1□□□□□ -2.75
HMGB3O15347 SNORD116-1-201ENST00000384335 95 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 MIR1302-11-201ENST00000408051 138 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 MIR1302-9-201ENST00000408365 138 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 MIR1302-10-201ENST00000408734 138 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 AL121914.1-201ENST00000450188 156 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 SNORD42B-201ENST00000458893 67 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 YWHAEP3-201ENST00000582767 121 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 MIR1302-2-201ENST00000607096 138 ntBASIC-2.11□□□□□ -2.75
HMGB3O15347 Y_RNA.78-201ENST00000362970 110 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 RNU6-103P-201ENST00000363686 107 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 Y_RNA.298-201ENST00000364960 107 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 RNU6-576P-201ENST00000390854 102 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 SNORD2.1-201ENST00000458762 69 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 AC069439.1-201ENST00000494739 167 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 AC090574.1-201ENST00000623186 233 ntBASIC-2.12□□□□□ -2.75
HMGB3O15347 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 Y_RNA.279-201ENST00000364763 95 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 U3.27-201ENST00000391237 200 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 RNU7-152P-201ENST00000458982 64 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 RNU6-983P-201ENST00000516004 103 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-2.13□□□□□ -2.75
HMGB3O15347 AC084782.3-201ENST00000612282 578 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 AL445584.3-201ENST00000617173 78 ntBASIC-2.13□□□□□ -2.75
HMGB3O15347 RNU6-540P-201ENST00000384622 101 ntBASIC-2.14□□□□□ -2.75
HMGB3O15347 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-2.14□□□□□ -2.75
HMGB3O15347 Y_RNA.180-201ENST00000363867 113 ntBASIC-2.15□□□□□ -2.75
HMGB3O15347 SNORA63.6-201ENST00000364921 119 ntBASIC-2.15□□□□□ -2.75
HMGB3O15347 RNU6-1130P-201ENST00000365434 107 ntBASIC-2.15□□□□□ -2.75
HMGB3O15347 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.15□□□□□ -2.75
HMGB3O15347 MIR6818-201ENST00000621576 65 ntBASIC-2.15□□□□□ -2.75
HMGB3O15347 RNU6-208P-201ENST00000362431 107 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 RNY4P6-201ENST00000363667 96 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 Y_RNA.173-201ENST00000363776 113 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 SNORD114-3-201ENST00000364969 75 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 AC022028.1-201ENST00000412054 408 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 AC068339.1-201ENST00000526965 141 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 AL353803.5-201ENST00000599815 141 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 MIR6502-201ENST00000617296 76 ntBASIC-2.16□□□□□ -2.76
HMGB3O15347 Y_RNA.387-201ENST00000383918 102 ntBASIC-2.17□□□□□ -2.76
HMGB3O15347 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-2.17□□□□□ -2.76
HMGB3O15347 MIR4464-201ENST00000580818 92 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms