Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.7□□□□□ -2.3
NPC1O15118 BX276092.1-201ENST00000427368 251 ntBASIC0.7□□□□□ -2.3
NPC1O15118 AL353813.1-201ENST00000440700 253 ntBASIC0.7□□□□□ -2.3
NPC1O15118 AC068339.1-201ENST00000526965 141 ntBASIC0.7□□□□□ -2.3
NPC1O15118 RNY1P8-201ENST00000383970 114 ntBASIC0.69□□□□□ -2.3
NPC1O15118 MIR644A-201ENST00000385262 94 ntBASIC0.69□□□□□ -2.3
NPC1O15118 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.69□□□□□ -2.3
NPC1O15118 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
NPC1O15118 RNU6-834P-201ENST00000362367 110 ntBASIC0.68□□□□□ -2.3
NPC1O15118 Y_RNA.35-201ENST00000362601 101 ntBASIC0.68□□□□□ -2.3
NPC1O15118 Y_RNA.49-201ENST00000362714 112 ntBASIC0.68□□□□□ -2.3
NPC1O15118 SNORD114-23-201ENST00000363536 72 ntBASIC0.68□□□□□ -2.3
NPC1O15118 RNA5SP245-201ENST00000364239 121 ntBASIC0.68□□□□□ -2.3
NPC1O15118 Y_RNA.281-201ENST00000364774 94 ntBASIC0.68□□□□□ -2.3
NPC1O15118 MIR635-201ENST00000384830 98 ntBASIC0.68□□□□□ -2.3
NPC1O15118 MIR548I2-201ENST00000408348 149 ntBASIC0.68□□□□□ -2.3
NPC1O15118 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.68□□□□□ -2.3
NPC1O15118 RNU6-412P-201ENST00000516434 106 ntBASIC0.68□□□□□ -2.3
NPC1O15118 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
NPC1O15118 RNA5SP395-201ENST00000516567 118 ntBASIC0.68□□□□□ -2.3
NPC1O15118 RNU6-135P-201ENST00000516769 101 ntBASIC0.68□□□□□ -2.3
NPC1O15118 MTND5P40-201ENST00000559945 246 ntBASIC0.68□□□□□ -2.3
NPC1O15118 SNORD38.1-201ENST00000363863 68 ntBASIC0.67□□□□□ -2.3
NPC1O15118 U8.6-201ENST00000364939 135 ntBASIC0.67□□□□□ -2.3
NPC1O15118 RNU6-1056P-201ENST00000383996 107 ntBASIC0.67□□□□□ -2.3
NPC1O15118 RNU6-571P-201ENST00000384128 107 ntBASIC0.67□□□□□ -2.3
NPC1O15118 RNU6-1201P-201ENST00000384227 107 ntBASIC0.67□□□□□ -2.3
NPC1O15118 AC092628.1-201ENST00000436250 252 ntBASIC0.67□□□□□ -2.3
NPC1O15118 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.67□□□□□ -2.3
NPC1O15118 RNU6-1006P-201ENST00000516998 103 ntBASIC0.67□□□□□ -2.3
NPC1O15118 AC138869.1-201ENST00000568623 124 ntBASIC0.67□□□□□ -2.3
NPC1O15118 MIR5009-201ENST00000578736 100 ntBASIC0.67□□□□□ -2.3
NPC1O15118 AL442128.1-201ENST00000615151 90 ntBASIC0.67□□□□□ -2.3
NPC1O15118 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.67□□□□□ -2.3
NPC1O15118 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.67□□□□□ -2.3
NPC1O15118 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
NPC1O15118 RNU6-1081P-201ENST00000384537 107 ntBASIC0.66□□□□□ -2.3
NPC1O15118 SNRPGP12-201ENST00000449481 213 ntBASIC0.66□□□□□ -2.3
NPC1O15118 Y_RNA.30-201ENST00000362572 97 ntBASIC0.65□□□□□ -2.31
NPC1O15118 SPINT5P-201ENST00000448174 155 ntBASIC0.65□□□□□ -2.31
NPC1O15118 RNA5SP94-201ENST00000516917 108 ntBASIC0.65□□□□□ -2.31
NPC1O15118 MIR4694-201ENST00000578534 80 ntBASIC0.65□□□□□ -2.31
NPC1O15118 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.65□□□□□ -2.31
NPC1O15118 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NPC1O15118 RNU6-170P-201ENST00000362832 104 ntBASIC0.64□□□□□ -2.31
NPC1O15118 Y_RNA.115-201ENST00000363272 98 ntBASIC0.64□□□□□ -2.31
NPC1O15118 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
NPC1O15118 RNU6-1229P-201ENST00000364295 107 ntBASIC0.64□□□□□ -2.31
NPC1O15118 Y_RNA.247-201ENST00000364500 92 ntBASIC0.64□□□□□ -2.31
NPC1O15118 Y_RNA.377-201ENST00000365644 108 ntBASIC0.64□□□□□ -2.31
NPC1O15118 AC244505.6-201ENST00000452829 130 ntBASIC0.64□□□□□ -2.31
NPC1O15118 TRAJ51-201ENST00000504127 63 ntBASIC0.64□□□□□ -2.31
NPC1O15118 RNA5SP436-201ENST00000516020 115 ntBASIC0.64□□□□□ -2.31
NPC1O15118 RNU4-54P-201ENST00000516428 129 ntBASIC0.64□□□□□ -2.31
NPC1O15118 RNU6-850P-201ENST00000516934 103 ntBASIC0.64□□□□□ -2.31
NPC1O15118 AC096720.1-201ENST00000604441 183 ntBASIC0.64□□□□□ -2.31
NPC1O15118 RNU6-90P-201ENST00000606352 106 ntBASIC0.64□□□□□ -2.31
NPC1O15118 RNU6-1107P-201ENST00000364817 104 ntBASIC0.63□□□□□ -2.31
NPC1O15118 Y_RNA.323-201ENST00000365157 109 ntBASIC0.63□□□□□ -2.31
NPC1O15118 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
NPC1O15118 Y_RNA.567-201ENST00000384736 106 ntBASIC0.63□□□□□ -2.31
NPC1O15118 MIR577-201ENST00000385196 96 ntBASIC0.63□□□□□ -2.31
NPC1O15118 MIR548G-201ENST00000408442 89 ntBASIC0.63□□□□□ -2.31
NPC1O15118 MIR6129-201ENST00000616087 109 ntBASIC0.63□□□□□ -2.31
NPC1O15118 U2.22-201ENST00000636441 106 ntBASIC0.63□□□□□ -2.31
NPC1O15118 RNY3P2-201ENST00000362918 102 ntBASIC0.62□□□□□ -2.31
NPC1O15118 Y_RNA.273-201ENST00000364703 102 ntBASIC0.62□□□□□ -2.31
NPC1O15118 SNORD63B-201ENST00000411005 70 ntBASIC0.62□□□□□ -2.31
NPC1O15118 MIR4639-201ENST00000584938 69 ntBASIC0.62□□□□□ -2.31
NPC1O15118 AC092634.7-201ENST00000621022 103 ntBASIC0.62□□□□□ -2.31
NPC1O15118 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
NPC1O15118 RNA5SP257-201ENST00000363023 116 ntBASIC0.61□□□□□ -2.31
NPC1O15118 RNU6-832P-201ENST00000363319 107 ntBASIC0.61□□□□□ -2.31
NPC1O15118 Y_RNA.342-201ENST00000365352 113 ntBASIC0.61□□□□□ -2.31
NPC1O15118 RNU6-1014P-201ENST00000383940 103 ntBASIC0.61□□□□□ -2.31
NPC1O15118 SNORD28-201ENST00000384706 75 ntBASIC0.61□□□□□ -2.31
NPC1O15118 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
NPC1O15118 RN7SKP12-201ENST00000516275 143 ntBASIC0.61□□□□□ -2.31
NPC1O15118 MIR8087-201ENST00000612745 78 ntBASIC0.61□□□□□ -2.31
NPC1O15118 AL109933.3-201ENST00000619095 188 ntBASIC0.61□□□□□ -2.31
NPC1O15118 AC097635.1-201ENST00000450678 155 ntBASIC0.6□□□□□ -2.31
NPC1O15118 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.6□□□□□ -2.31
NPC1O15118 RNA5SP47-201ENST00000517230 109 ntBASIC0.6□□□□□ -2.31
NPC1O15118 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
NPC1O15118 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
NPC1O15118 MIR330-201ENST00000362196 94 ntBASIC0.59□□□□□ -2.31
NPC1O15118 SNORD115-24-201ENST00000363528 82 ntBASIC0.59□□□□□ -2.31
NPC1O15118 RNU6-1099P-201ENST00000363533 107 ntBASIC0.59□□□□□ -2.31
NPC1O15118 RNA5SP517-201ENST00000364724 117 ntBASIC0.59□□□□□ -2.31
NPC1O15118 MIR599-201ENST00000385069 95 ntBASIC0.59□□□□□ -2.31
NPC1O15118 MIR519A1-201ENST00000385257 85 ntBASIC0.59□□□□□ -2.31
NPC1O15118 SNORD71-201ENST00000411292 86 ntBASIC0.59□□□□□ -2.31
NPC1O15118 AC141557.1-201ENST00000540982 400 ntBASIC0.59□□□□□ -2.31
NPC1O15118 MIR548AI-201ENST00000579940 88 ntBASIC0.59□□□□□ -2.31
NPC1O15118 AC244669.1-204ENST00000621564 178 ntBASIC0.59□□□□□ -2.31
NPC1O15118 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.59□□□□□ -2.31
NPC1O15118 SNORA36.1-201ENST00000363424 132 ntBASIC0.58□□□□□ -2.32
NPC1O15118 Y_RNA.173-201ENST00000363776 113 ntBASIC0.58□□□□□ -2.32
NPC1O15118 RNU7-195P-201ENST00000458793 62 ntBASIC0.58□□□□□ -2.32
NPC1O15118 Y_RNA.659-201ENST00000515994 113 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 272.1 ms