Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNORD56B-201ENST00000384713 71 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 RNU6-713P-201ENST00000384761 107 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 SNORA3B-201ENST00000391305 131 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 MIR8062-201ENST00000621515 85 ntBASIC-1.11□□□□□ -2.59
LSM1O15116 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.12□□□□□ -2.59
LSM1O15116 RNU6-818P-201ENST00000364837 108 ntBASIC-1.12□□□□□ -2.59
LSM1O15116 RNA5SP25-201ENST00000410815 110 ntBASIC-1.12□□□□□ -2.59
LSM1O15116 RNA5SP395-201ENST00000516567 118 ntBASIC-1.12□□□□□ -2.59
LSM1O15116 MIR3681-201ENST00000580089 72 ntBASIC-1.12□□□□□ -2.59
LSM1O15116 RNA5SP368-201ENST00000364298 116 ntBASIC-1.13□□□□□ -2.59
LSM1O15116 Y_RNA.460-201ENST00000384255 102 ntBASIC-1.13□□□□□ -2.59
LSM1O15116 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.13□□□□□ -2.59
LSM1O15116 AC244090.1-201ENST00000441884 93 ntBASIC-1.13□□□□□ -2.59
LSM1O15116 MIR4280-201ENST00000582178 76 ntBASIC-1.13□□□□□ -2.59
LSM1O15116 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.13□□□□□ -2.59
LSM1O15116 AC145423.2-201ENST00000610631 239 ntBASIC-1.13□□□□□ -2.59
LSM1O15116 U6.106-201ENST00000636360 105 ntBASIC-1.13□□□□□ -2.59
LSM1O15116 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.15□□□□□ -2.59
LSM1O15116 SNORA49-201ENST00000386157 136 ntBASIC-1.15□□□□□ -2.59
LSM1O15116 TRDV1-202ENST00000621643 102 ntBASIC-1.15□□□□□ -2.59
LSM1O15116 U6.100-201ENST00000636230 99 ntBASIC-1.15□□□□□ -2.59
LSM1O15116 Y_RNA.461-201ENST00000384263 103 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 RNY1P7-201ENST00000384743 110 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 MIR652-201ENST00000385278 98 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 SNORA75.5-201ENST00000391291 81 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 MIR1302-6-201ENST00000408466 90 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 RNU7-55P-201ENST00000459426 62 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 MIR4801-201ENST00000582704 82 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 U6.104-201ENST00000637979 90 ntBASIC-1.16□□□□□ -2.6
LSM1O15116 SNORD36A-201ENST00000362874 73 ntBASIC-1.17□□□□□ -2.6
LSM1O15116 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.17□□□□□ -2.6
LSM1O15116 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.17□□□□□ -2.6
LSM1O15116 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.17□□□□□ -2.6
LSM1O15116 RNY4P20-201ENST00000516678 93 ntBASIC-1.17□□□□□ -2.6
LSM1O15116 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.17□□□□□ -2.6
LSM1O15116 U4.1-201ENST00000620349 87 ntBASIC-1.17□□□□□ -2.6
LSM1O15116 RNU6-508P-201ENST00000363231 103 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 SNORA33.2-201ENST00000365413 134 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 SNORD58.1-201ENST00000391313 66 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 AP001328.1-201ENST00000528550 176 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 AP000676.1-201ENST00000533307 52 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.18□□□□□ -2.6
LSM1O15116 MIR6851-201ENST00000617060 67 ntBASIC-1.18□□□□□ -2.6
LSM1O15116 SNORD115-19-201ENST00000363098 82 ntBASIC-1.19□□□□□ -2.6
LSM1O15116 SNORD115-18-201ENST00000363293 82 ntBASIC-1.19□□□□□ -2.6
LSM1O15116 SNORD115-17-201ENST00000364612 82 ntBASIC-1.19□□□□□ -2.6
LSM1O15116 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.2□□□□□ -2.6
LSM1O15116 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.2□□□□□ -2.6
LSM1O15116 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.2□□□□□ -2.6
LSM1O15116 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.2□□□□□ -2.6
LSM1O15116 AL445193.1-201ENST00000441183 141 ntBASIC-1.2□□□□□ -2.6
LSM1O15116 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.2□□□□□ -2.6
LSM1O15116 SNORD27-201ENST00000363981 72 ntBASIC-1.21□□□□□ -2.6
LSM1O15116 SNORD38.2-201ENST00000384470 69 ntBASIC-1.21□□□□□ -2.6
LSM1O15116 MIR196A1-201ENST00000388006 70 ntBASIC-1.21□□□□□ -2.6
LSM1O15116 AL161932.1-201ENST00000437408 146 ntBASIC-1.21□□□□□ -2.6
LSM1O15116 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.21□□□□□ -2.6
LSM1O15116 RNU6-309P-201ENST00000364573 106 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 SNORD114-15-201ENST00000364687 72 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 SNORA13-201ENST00000458790 133 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 RNU6-138P-201ENST00000515952 107 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 RNU6-635P-201ENST00000516651 102 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 RNU6-521P-201ENST00000516663 105 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 MIR3646-201ENST00000578301 84 ntBASIC-1.22□□□□□ -2.6
LSM1O15116 SNORD115-25-201ENST00000362619 82 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 RNU6-639P-201ENST00000384074 107 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 MTCYBP6-201ENST00000441810 138 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 AC021146.6-201ENST00000514659 117 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 AL137067.1-201ENST00000615933 120 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 MIR548O2-201ENST00000616090 70 ntBASIC-1.23□□□□□ -2.61
LSM1O15116 RNY1P11-201ENST00000363759 113 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 RNU6-901P-201ENST00000384593 106 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 MIR204-201ENST00000385200 110 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 RNU6-243P-201ENST00000391140 107 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 RNU6-588P-201ENST00000410281 105 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.24□□□□□ -2.61
LSM1O15116 AC107027.2-201ENST00000512197 115 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 AC108081.1-201ENST00000604358 221 ntBASIC-1.24□□□□□ -2.61
LSM1O15116 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 MT-TI-201ENST00000387365 69 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 RNU6-918P-201ENST00000391219 106 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 MIR548H3-201ENST00000408771 118 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 snoU13.13-201ENST00000458842 104 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 SNORD38.3-201ENST00000516599 73 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 SNORA40.17-201ENST00000517256 115 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 MIR6844-201ENST00000637122 62 ntBASIC-1.25□□□□□ -2.61
LSM1O15116 RNU6-957P-201ENST00000363652 99 ntBASIC-1.26□□□□□ -2.61
LSM1O15116 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.26□□□□□ -2.61
LSM1O15116 MTND2P23-201ENST00000422990 651 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 377.9 ms