Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MIR101-2-201ENST00000362195 79 ntBASIC1.87□□□□□ -2.11
SOX1O00570 Y_RNA.283-201ENST00000364798 112 ntBASIC1.87□□□□□ -2.11
SOX1O00570 RNA5SP160-201ENST00000364866 120 ntBASIC1.87□□□□□ -2.11
SOX1O00570 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.87□□□□□ -2.11
SOX1O00570 SNORD100-201ENST00000408573 76 ntBASIC1.87□□□□□ -2.11
SOX1O00570 AC090255.1-201ENST00000495779 349 ntBASIC1.87□□□□□ -2.11
SOX1O00570 MIR514B-201ENST00000516774 80 ntBASIC1.87□□□□□ -2.11
SOX1O00570 MIR548H5-201ENST00000580314 60 ntBASIC1.87□□□□□ -2.11
SOX1O00570 RNU6-934P-201ENST00000365154 107 ntBASIC1.86□□□□□ -2.11
SOX1O00570 MIR520E-201ENST00000384867 87 ntBASIC1.86□□□□□ -2.11
SOX1O00570 RNU6-466P-201ENST00000391224 103 ntBASIC1.86□□□□□ -2.11
SOX1O00570 RNU1-78P-201ENST00000391248 165 ntBASIC1.86□□□□□ -2.11
SOX1O00570 MIR1257-201ENST00000408490 117 ntBASIC1.86□□□□□ -2.11
SOX1O00570 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
SOX1O00570 RPS29P1-201ENST00000465274 159 ntBASIC1.86□□□□□ -2.11
SOX1O00570 AC079804.2-201ENST00000490376 200 ntBASIC1.86□□□□□ -2.11
SOX1O00570 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.86□□□□□ -2.11
SOX1O00570 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
SOX1O00570 AC013244.2-201ENST00000603396 103 ntBASIC1.86□□□□□ -2.11
SOX1O00570 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
SOX1O00570 Y_RNA.56-201ENST00000362798 112 ntBASIC1.85□□□□□ -2.11
SOX1O00570 RNU1-93P-201ENST00000364704 169 ntBASIC1.85□□□□□ -2.11
SOX1O00570 AL450471.1-201ENST00000447509 127 ntBASIC1.85□□□□□ -2.11
SOX1O00570 RNU6-75P-201ENST00000515944 104 ntBASIC1.85□□□□□ -2.11
SOX1O00570 RNA5SP436-201ENST00000516020 115 ntBASIC1.85□□□□□ -2.11
SOX1O00570 RNU6-557P-201ENST00000516842 110 ntBASIC1.85□□□□□ -2.11
SOX1O00570 SNORD92-201ENST00000585078 85 ntBASIC1.85□□□□□ -2.11
SOX1O00570 MIR6082-201ENST00000613604 109 ntBASIC1.85□□□□□ -2.11
SOX1O00570 RNU6-1094P-201ENST00000362416 104 ntBASIC1.84□□□□□ -2.11
SOX1O00570 RNU6-478P-201ENST00000363904 110 ntBASIC1.84□□□□□ -2.11
SOX1O00570 Y_RNA.330-201ENST00000365230 109 ntBASIC1.84□□□□□ -2.11
SOX1O00570 Y_RNA.536-201ENST00000384621 113 ntBASIC1.84□□□□□ -2.11
SOX1O00570 MIR548U-201ENST00000390728 81 ntBASIC1.84□□□□□ -2.11
SOX1O00570 snoU13.21-201ENST00000459368 105 ntBASIC1.84□□□□□ -2.11
SOX1O00570 AC048334.1-201ENST00000477975 159 ntBASIC1.84□□□□□ -2.11
SOX1O00570 RNA5SP61-201ENST00000516453 100 ntBASIC1.84□□□□□ -2.11
SOX1O00570 SNORA18.5-201ENST00000516616 101 ntBASIC1.84□□□□□ -2.11
SOX1O00570 RNU6-1223P-201ENST00000517124 104 ntBASIC1.84□□□□□ -2.11
SOX1O00570 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.84□□□□□ -2.11
SOX1O00570 AC036111.3-201ENST00000526389 112 ntBASIC1.84□□□□□ -2.11
SOX1O00570 AL096840.1-201ENST00000603287 93 ntBASIC1.84□□□□□ -2.11
SOX1O00570 AC145423.2-201ENST00000610631 239 ntBASIC1.84□□□□□ -2.11
SOX1O00570 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
SOX1O00570 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SOX1O00570 SNORA63.2-201ENST00000362603 126 ntBASIC1.83□□□□□ -2.12
SOX1O00570 RNU4-52P-201ENST00000384209 138 ntBASIC1.83□□□□□ -2.12
SOX1O00570 MIR519A1-201ENST00000385257 85 ntBASIC1.83□□□□□ -2.12
SOX1O00570 RNA5SP292-201ENST00000390974 118 ntBASIC1.83□□□□□ -2.12
SOX1O00570 SNORD83.1-201ENST00000411362 77 ntBASIC1.83□□□□□ -2.12
SOX1O00570 HMGN2P19-201ENST00000425149 265 ntBASIC1.83□□□□□ -2.12
SOX1O00570 AC073261.1-201ENST00000429409 121 ntBASIC1.83□□□□□ -2.12
SOX1O00570 RNU6-717P-201ENST00000459076 104 ntBASIC1.83□□□□□ -2.12
SOX1O00570 TRAJ51-201ENST00000504127 63 ntBASIC1.83□□□□□ -2.12
SOX1O00570 RNU6-765P-201ENST00000516916 99 ntBASIC1.83□□□□□ -2.12
SOX1O00570 SNORD53B-201ENST00000577887 78 ntBASIC1.83□□□□□ -2.12
SOX1O00570 MIR4422-201ENST00000581938 83 ntBASIC1.83□□□□□ -2.12
SOX1O00570 U7.4-201ENST00000614961 63 ntBASIC1.83□□□□□ -2.12
SOX1O00570 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SOX1O00570 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SOX1O00570 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
SOX1O00570 Y_RNA.13-201ENST00000362403 112 ntBASIC1.82□□□□□ -2.12
SOX1O00570 SNORD111-201ENST00000408139 94 ntBASIC1.82□□□□□ -2.12
SOX1O00570 RNU6-380P-201ENST00000410207 107 ntBASIC1.82□□□□□ -2.12
SOX1O00570 RN7SKP88-201ENST00000516847 250 ntBASIC1.82□□□□□ -2.12
SOX1O00570 MIR3064-201ENST00000581130 66 ntBASIC1.82□□□□□ -2.12
SOX1O00570 AC104996.3-201ENST00000590718 94 ntBASIC1.82□□□□□ -2.12
SOX1O00570 7SK.8-201ENST00000612110 250 ntBASIC1.82□□□□□ -2.12
SOX1O00570 7SK.11-201ENST00000615477 250 ntBASIC1.82□□□□□ -2.12
SOX1O00570 7SK.13-201ENST00000622040 250 ntBASIC1.82□□□□□ -2.12
SOX1O00570 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SOX1O00570 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.81□□□□□ -2.12
SOX1O00570 RNU6-957P-201ENST00000363652 99 ntBASIC1.81□□□□□ -2.12
SOX1O00570 MIR125B2-201ENST00000385128 89 ntBASIC1.81□□□□□ -2.12
SOX1O00570 AC008834.1-201ENST00000511612 175 ntBASIC1.81□□□□□ -2.12
SOX1O00570 Y_RNA.660-201ENST00000516002 120 ntBASIC1.81□□□□□ -2.12
SOX1O00570 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.81□□□□□ -2.12
SOX1O00570 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SOX1O00570 RNU6-686P-201ENST00000364839 107 ntBASIC1.8□□□□□ -2.12
SOX1O00570 RNU6-132P-201ENST00000383863 107 ntBASIC1.8□□□□□ -2.12
SOX1O00570 Y_RNA.491-201ENST00000384417 107 ntBASIC1.8□□□□□ -2.12
SOX1O00570 MIR889-201ENST00000401280 79 ntBASIC1.8□□□□□ -2.12
SOX1O00570 HMGN2P38-201ENST00000423806 265 ntBASIC1.8□□□□□ -2.12
SOX1O00570 RNU7-195P-201ENST00000458793 62 ntBASIC1.8□□□□□ -2.12
SOX1O00570 RNU1-92P-201ENST00000517017 135 ntBASIC1.8□□□□□ -2.12
SOX1O00570 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
SOX1O00570 MIRLET7A1-201ENST00000362295 80 ntBASIC1.79□□□□□ -2.12
SOX1O00570 RNU6-1260P-201ENST00000362944 107 ntBASIC1.79□□□□□ -2.12
SOX1O00570 RNU6-1229P-201ENST00000364295 107 ntBASIC1.79□□□□□ -2.12
SOX1O00570 SNORA75.2-201ENST00000391138 150 ntBASIC1.79□□□□□ -2.12
SOX1O00570 SNORA75.3-201ENST00000391231 150 ntBASIC1.79□□□□□ -2.12
SOX1O00570 RPS27P16-201ENST00000425758 201 ntBASIC1.79□□□□□ -2.12
SOX1O00570 AC092628.1-201ENST00000436250 252 ntBASIC1.79□□□□□ -2.12
SOX1O00570 FGF7P7-201ENST00000514120 227 ntBASIC1.79□□□□□ -2.12
SOX1O00570 SNORA31.2-201ENST00000516019 134 ntBASIC1.79□□□□□ -2.12
SOX1O00570 Y_RNA.809-201ENST00000516058 95 ntBASIC1.79□□□□□ -2.12
SOX1O00570 AC106800.4-201ENST00000614905 153 ntBASIC1.79□□□□□ -2.12
SOX1O00570 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.78□□□□□ -2.12
SOX1O00570 RPS26P5-201ENST00000418544 335 ntBASIC1.78□□□□□ -2.12
SOX1O00570 AL591704.2-201ENST00000421658 181 ntBASIC1.78□□□□□ -2.12
SOX1O00570 MIR4771-2-201ENST00000577758 74 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms