Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU6-448P-201ENST00000517052 107 ntBASIC1.19□□□□□ -2.22
CCDC85CA6NKD9 RNU6-832P-201ENST00000363319 107 ntBASIC1.18□□□□□ -2.22
CCDC85CA6NKD9 RNU6-1099P-201ENST00000363533 107 ntBASIC1.18□□□□□ -2.22
CCDC85CA6NKD9 Y_RNA.163-201ENST00000363702 113 ntBASIC1.18□□□□□ -2.22
CCDC85CA6NKD9 MIR573-201ENST00000384964 99 ntBASIC1.18□□□□□ -2.22
CCDC85CA6NKD9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.18□□□□□ -2.22
CCDC85CA6NKD9 DEFB131E-201ENST00000532329 154 ntBASIC1.18□□□□□ -2.22
CCDC85CA6NKD9 AL353765.1-201ENST00000605514 183 ntBASIC1.18□□□□□ -2.22
CCDC85CA6NKD9 RNU6-106P-201ENST00000384405 107 ntBASIC1.17□□□□□ -2.22
CCDC85CA6NKD9 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
CCDC85CA6NKD9 SNORD100-201ENST00000408573 76 ntBASIC1.17□□□□□ -2.22
CCDC85CA6NKD9 SNRPGP12-201ENST00000449481 213 ntBASIC1.17□□□□□ -2.22
CCDC85CA6NKD9 MIR4698-201ENST00000577795 80 ntBASIC1.16□□□□□ -2.22
CCDC85CA6NKD9 AC013244.2-201ENST00000603396 103 ntBASIC1.16□□□□□ -2.22
CCDC85CA6NKD9 MIR2909-201ENST00000617113 69 ntBASIC1.16□□□□□ -2.22
CCDC85CA6NKD9 Y_RNA.56-201ENST00000362798 112 ntBASIC1.15□□□□□ -2.23
CCDC85CA6NKD9 RNU6-571P-201ENST00000384128 107 ntBASIC1.15□□□□□ -2.23
CCDC85CA6NKD9 Y_RNA.536-201ENST00000384621 113 ntBASIC1.15□□□□□ -2.23
CCDC85CA6NKD9 AL035461.1-201ENST00000421490 332 ntBASIC1.15□□□□□ -2.23
CCDC85CA6NKD9 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
CCDC85CA6NKD9 MIR4500-201ENST00000579472 76 ntBASIC1.15□□□□□ -2.23
CCDC85CA6NKD9 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
CCDC85CA6NKD9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC85CA6NKD9 MIR532-201ENST00000385025 91 ntBASIC1.14□□□□□ -2.23
CCDC85CA6NKD9 MIR1302-5-201ENST00000408164 150 ntBASIC1.14□□□□□ -2.23
CCDC85CA6NKD9 SNORD99-201ENST00000408612 74 ntBASIC1.14□□□□□ -2.23
CCDC85CA6NKD9 RNU6-554P-201ENST00000410466 106 ntBASIC1.14□□□□□ -2.23
CCDC85CA6NKD9 AC244098.3-201ENST00000424803 96 ntBASIC1.14□□□□□ -2.23
CCDC85CA6NKD9 Y_RNA.10-201ENST00000362371 110 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 Y_RNA.247-201ENST00000364500 92 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 AC004941.2-201ENST00000427009 228 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 RNU6-904P-201ENST00000516206 101 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 Y_RNA.697-201ENST00000516776 113 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 AC141557.1-201ENST00000540982 400 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 AC138907.6-201ENST00000568401 126 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 RNU7-10P-201ENST00000607194 63 ntBASIC1.13□□□□□ -2.23
CCDC85CA6NKD9 SNORA22-201ENST00000383907 134 ntBASIC1.12□□□□□ -2.23
CCDC85CA6NKD9 RNU6-291P-201ENST00000384720 107 ntBASIC1.12□□□□□ -2.23
CCDC85CA6NKD9 MIR608-201ENST00000384820 100 ntBASIC1.12□□□□□ -2.23
CCDC85CA6NKD9 RNA5SP193-201ENST00000410353 107 ntBASIC1.12□□□□□ -2.23
CCDC85CA6NKD9 MIR548H5-201ENST00000580314 60 ntBASIC1.12□□□□□ -2.23
CCDC85CA6NKD9 MIR4439-201ENST00000583746 80 ntBASIC1.12□□□□□ -2.23
CCDC85CA6NKD9 uc_338.28-201ENST00000612082 187 ntBASIC1.12□□□□□ -2.23
CCDC85CA6NKD9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 MIR101-2-201ENST00000362195 79 ntBASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 Y_RNA.173-201ENST00000363776 113 ntBASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 RNU4-36P-201ENST00000364294 144 ntBASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 RNU4-45P-201ENST00000365469 141 ntBASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 MIR548G-201ENST00000408442 89 ntBASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 uc_338.16-201ENST00000621804 95 ntBASIC1.11□□□□□ -2.23
CCDC85CA6NKD9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 RNU6-1113P-201ENST00000384348 107 ntBASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 MIR519A1-201ENST00000385257 85 ntBASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 RNU6-537P-201ENST00000517277 103 ntBASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 AC068338.1-201ENST00000565567 176 ntBASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 MIR3613-201ENST00000579844 87 ntBASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 RNU6-90P-201ENST00000606352 106 ntBASIC1.1□□□□□ -2.23
CCDC85CA6NKD9 RNU6-535P-201ENST00000384722 107 ntBASIC1.09□□□□□ -2.23
CCDC85CA6NKD9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.09□□□□□ -2.23
CCDC85CA6NKD9 Y_RNA.601-201ENST00000410500 113 ntBASIC1.09□□□□□ -2.23
CCDC85CA6NKD9 MIR3612-201ENST00000579753 87 ntBASIC1.09□□□□□ -2.23
CCDC85CA6NKD9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.24
CCDC85CA6NKD9 RNU6-766P-201ENST00000362478 107 ntBASIC1.08□□□□□ -2.24
CCDC85CA6NKD9 BX276092.1-201ENST00000427368 251 ntBASIC1.08□□□□□ -2.24
CCDC85CA6NKD9 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.08□□□□□ -2.24
CCDC85CA6NKD9 RNU6-850P-201ENST00000516934 103 ntBASIC1.08□□□□□ -2.24
CCDC85CA6NKD9 MIR4711-201ENST00000578274 70 ntBASIC1.08□□□□□ -2.24
CCDC85CA6NKD9 MIR4636-201ENST00000582271 80 ntBASIC1.08□□□□□ -2.24
CCDC85CA6NKD9 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.08□□□□□ -2.24
CCDC85CA6NKD9 RNU6-170P-201ENST00000362832 104 ntBASIC1.07□□□□□ -2.24
CCDC85CA6NKD9 SNORD45B-201ENST00000364617 72 ntBASIC1.07□□□□□ -2.24
CCDC85CA6NKD9 RNU6-135P-201ENST00000516769 101 ntBASIC1.07□□□□□ -2.24
CCDC85CA6NKD9 MTND5P40-201ENST00000559945 246 ntBASIC1.07□□□□□ -2.24
CCDC85CA6NKD9 AC011195.1-201ENST00000578177 177 ntBASIC1.07□□□□□ -2.24
CCDC85CA6NKD9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.06□□□□□ -2.24
CCDC85CA6NKD9 RNU6-44P-201ENST00000384045 107 ntBASIC1.06□□□□□ -2.24
CCDC85CA6NKD9 AC244505.6-201ENST00000452829 130 ntBASIC1.06□□□□□ -2.24
CCDC85CA6NKD9 Y_RNA.818-201ENST00000618813 71 ntBASIC1.06□□□□□ -2.24
CCDC85CA6NKD9 RNU6-1163P-201ENST00000364516 107 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 RNA5SP331-201ENST00000364986 107 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 RNA5SP117-201ENST00000365294 118 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 Y_RNA.342-201ENST00000365352 113 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 SNORA51.5-201ENST00000384126 131 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 AC092628.1-201ENST00000436250 252 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 SPINT5P-201ENST00000448174 155 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 AL031737.1-201ENST00000450125 223 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 SNORA31.14-201ENST00000516728 116 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 AC138869.1-201ENST00000568623 124 ntBASIC1.05□□□□□ -2.24
CCDC85CA6NKD9 MIR18A-201ENST00000362310 71 ntBASIC1.04□□□□□ -2.24
CCDC85CA6NKD9 RNU6-756P-201ENST00000383997 107 ntBASIC1.04□□□□□ -2.24
CCDC85CA6NKD9 RNU6-110P-201ENST00000384508 104 ntBASIC1.04□□□□□ -2.24
CCDC85CA6NKD9 MIR635-201ENST00000384830 98 ntBASIC1.04□□□□□ -2.24
CCDC85CA6NKD9 snoU13.19-201ENST00000459148 104 ntBASIC1.04□□□□□ -2.24
CCDC85CA6NKD9 Y_RNA.95-201ENST00000363079 95 ntBASIC1.03□□□□□ -2.24
CCDC85CA6NKD9 SNORA19.1-201ENST00000410656 129 ntBASIC1.03□□□□□ -2.24
CCDC85CA6NKD9 AC097635.1-201ENST00000450678 155 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 312.6 ms