Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.38□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.39□□□□□ -2.63
TRAV3A0A0B4J244 RNA5SP180-201ENST00000516181 101 ntBASIC-1.39□□□□□ -2.63
TRAV3A0A0B4J244 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.4□□□□□ -2.63
TRAV3A0A0B4J244 FGF7P6-202ENST00000451282 293 ntBASIC-1.4□□□□□ -2.63
TRAV3A0A0B4J244 RNU7-123P-201ENST00000515911 60 ntBASIC-1.4□□□□□ -2.63
TRAV3A0A0B4J244 SNORD27-201ENST00000363981 72 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 SNORD115-23-201ENST00000364461 82 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-243P-201ENST00000391140 107 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 AC138393.2-201ENST00000414742 246 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 RNU7-164P-201ENST00000459221 62 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-158P-201ENST00000517104 100 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 AL442663.2-201ENST00000554385 511 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 AC080013.6-201ENST00000606185 215 ntBASIC-1.41□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-235P-201ENST00000362644 107 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.117-201ENST00000363294 101 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 SNORD114-4-201ENST00000363962 75 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-905P-201ENST00000384434 107 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 MIR34C-201ENST00000384831 77 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 MIR1252-201ENST00000408861 65 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 AC138907.4-201ENST00000570107 226 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 MIR4306-201ENST00000583390 91 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 AC021443.1-201ENST00000604478 211 ntBASIC-1.42□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.43□□□□□ -2.64
TRAV3A0A0B4J244 RNU4-17P-201ENST00000365598 141 ntBASIC-1.43□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-616P-201ENST00000384353 107 ntBASIC-1.43□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.43□□□□□ -2.64
TRAV3A0A0B4J244 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.43□□□□□ -2.64
TRAV3A0A0B4J244 MIR4282-201ENST00000583613 67 ntBASIC-1.43□□□□□ -2.64
TRAV3A0A0B4J244 AL365265.1-201ENST00000621045 234 ntBASIC-1.43□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.276-201ENST00000364732 109 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 SNORD38.2-201ENST00000384470 69 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-588P-201ENST00000410281 105 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 AL161932.1-201ENST00000437408 146 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 AL121914.1-201ENST00000450188 156 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 AC097510.1-201ENST00000510945 133 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-240P-201ENST00000516098 97 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 MIR4744-201ENST00000581563 82 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 MIR4441-201ENST00000582623 100 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 AC073869.6-201ENST00000640656 341 ntBASIC-1.44□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 SNORD114-3-201ENST00000364969 75 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.384-201ENST00000383909 102 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 MT-TL1-201ENST00000386347 75 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 MTND3P22-201ENST00000510932 243 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 MIR4696-201ENST00000581431 70 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 MIR6773-201ENST00000612812 74 ntBASIC-1.45□□□□□ -2.64
TRAV3A0A0B4J244 MIRLET7B-201ENST00000385140 83 ntBASIC-1.46□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-823P-201ENST00000391042 103 ntBASIC-1.46□□□□□ -2.64
TRAV3A0A0B4J244 SNORD19B-201ENST00000459623 84 ntBASIC-1.46□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.46□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-664P-201ENST00000362381 107 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-623P-201ENST00000363143 105 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-957P-201ENST00000363652 99 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-770P-201ENST00000363929 105 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 SNORD101-201ENST00000384027 73 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-651P-201ENST00000411040 105 ntBASIC-1.47□□□□□ -2.64
TRAV3A0A0B4J244 RNU6-643P-201ENST00000384018 107 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 SNORD116-2-201ENST00000384274 95 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 RNU6-578P-201ENST00000390980 103 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 U3.27-201ENST00000391237 200 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 RNU6-337P-201ENST00000391243 106 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 ELOCP20-201ENST00000422460 345 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 snoU83B.1-201ENST00000517136 88 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 snoR1.1-201ENST00000628177 80 ntBASIC-1.48□□□□□ -2.65
TRAV3A0A0B4J244 Y_RNA.70-201ENST00000362886 110 ntBASIC-1.49□□□□□ -2.65
TRAV3A0A0B4J244 RNU6-54P-201ENST00000365563 107 ntBASIC-1.49□□□□□ -2.65
TRAV3A0A0B4J244 MIR1207-201ENST00000408249 87 ntBASIC-1.49□□□□□ -2.65
TRAV3A0A0B4J244 RNU6-935P-201ENST00000410371 100 ntBASIC-1.49□□□□□ -2.65
TRAV3A0A0B4J244 SNORD18.2-201ENST00000459604 70 ntBASIC-1.49□□□□□ -2.65
TRAV3A0A0B4J244 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.49□□□□□ -2.65
TRAV3A0A0B4J244 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.49□□□□□ -2.65
TRAV3A0A0B4J244 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.5□□□□□ -2.65
TRAV3A0A0B4J244 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.5□□□□□ -2.65
TRAV3A0A0B4J244 Y_RNA.197-201ENST00000364004 102 ntBASIC-1.5□□□□□ -2.65
TRAV3A0A0B4J244 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.5□□□□□ -2.65
TRAV3A0A0B4J244 SNORA62.4-201ENST00000365504 151 ntBASIC-1.5□□□□□ -2.65
TRAV3A0A0B4J244 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms