Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.25□□□□□ -2.21
NR2E3Q9Y5X4 RNA5SP395-201ENST00000516567 118 ntBASIC1.25□□□□□ -2.21
NR2E3Q9Y5X4 AC138749.4-201ENST00000563970 127 ntBASIC1.25□□□□□ -2.21
NR2E3Q9Y5X4 MIR924-201ENST00000638017 53 ntBASIC1.25□□□□□ -2.21
NR2E3Q9Y5X4 Y_RNA.348-201ENST00000365403 103 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 SNORD83.1-201ENST00000411362 77 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 AC015818.7-201ENST00000428754 109 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 AC087499.7-201ENST00000441958 109 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 RNU7-48P-201ENST00000458875 63 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-168P-201ENST00000516189 101 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 AC141557.1-201ENST00000540982 400 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 AP001318.4-201ENST00000616637 121 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 AC091304.10-201ENST00000641554 121 ntBASIC1.24□□□□□ -2.21
NR2E3Q9Y5X4 MIR373-201ENST00000362273 69 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-1298P-201ENST00000362456 101 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-640P-201ENST00000363693 105 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNY1P2-201ENST00000364820 117 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-447P-201ENST00000410293 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-1118P-201ENST00000410382 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-1076P-201ENST00000410397 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-355P-201ENST00000410427 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-791P-201ENST00000410467 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-994P-201ENST00000410507 111 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-705P-201ENST00000410601 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-1100P-201ENST00000410691 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-860P-201ENST00000410860 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-1217P-201ENST00000411276 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-785P-201ENST00000411324 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 AC020891.4-201ENST00000605745 93 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 U6.90-201ENST00000614007 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 AL442128.1-201ENST00000615151 90 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 U6.70-201ENST00000620287 104 ntBASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
NR2E3Q9Y5X4 RNU1-36P-201ENST00000365130 165 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-32P-201ENST00000383948 107 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-13P-201ENST00000384248 107 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-905P-201ENST00000384434 107 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-12P-201ENST00000384604 107 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 RNU6-41P-201ENST00000384741 107 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 AC067940.1-201ENST00000458411 300 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 DEFB131E-201ENST00000532329 154 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 MIR4491-201ENST00000581087 68 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 MIR548Z-201ENST00000584743 97 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 MIR6857-201ENST00000613267 93 ntBASIC1.22□□□□□ -2.21
NR2E3Q9Y5X4 Y_RNA.98-201ENST00000363109 102 ntBASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 Y_RNA.601-201ENST00000410500 113 ntBASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 FABP5P4-201ENST00000437203 171 ntBASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 RNU7-185P-201ENST00000459215 60 ntBASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 AC012531.4-201ENST00000616509 177 ntBASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 AL512310.12-203ENST00000640543 90 ntBASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
NR2E3Q9Y5X4 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-934P-201ENST00000365154 107 ntBASIC1.2□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-1113P-201ENST00000384348 107 ntBASIC1.2□□□□□ -2.22
NR2E3Q9Y5X4 MIR4777-201ENST00000583710 86 ntBASIC1.2□□□□□ -2.22
NR2E3Q9Y5X4 Y_RNA.818-201ENST00000618813 71 ntBASIC1.2□□□□□ -2.22
NR2E3Q9Y5X4 HSBP1P2-201ENST00000299671 229 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-865P-201ENST00000364772 107 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 RPS26P5-201ENST00000418544 335 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 RPS29P28-201ENST00000446439 141 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 SNORD124-201ENST00000459577 104 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 SCARNA23-201ENST00000516060 130 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-795P-201ENST00000516323 103 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-158P-201ENST00000517104 100 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 AC133485.1-201ENST00000567176 124 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 MIR8066-201ENST00000617280 78 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 AP001362.1-201ENST00000625165 124 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 U6.109-201ENST00000636749 87 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 AC023934.1-201ENST00000574529 2389 ntBASIC1.19□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-170P-201ENST00000362832 104 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 RNA5SP257-201ENST00000363023 116 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 RNA5SP133-201ENST00000363368 119 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 SNORD38.1-201ENST00000363863 68 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 RNU4-36P-201ENST00000364294 144 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 MIR942-201ENST00000401111 86 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 SNORA25.16-201ENST00000516741 121 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 MIR4771-2-201ENST00000577758 74 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 MIR4771-1-201ENST00000582617 74 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 AL109933.3-201ENST00000619095 188 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 AC010487.4-201ENST00000637027 61 ntBASIC1.18□□□□□ -2.22
NR2E3Q9Y5X4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.17□□□□□ -2.22
NR2E3Q9Y5X4 Y_RNA.544-201ENST00000384650 113 ntBASIC1.17□□□□□ -2.22
NR2E3Q9Y5X4 SNORD93-201ENST00000408813 74 ntBASIC1.17□□□□□ -2.22
NR2E3Q9Y5X4 RNA5SP330-201ENST00000517096 96 ntBASIC1.17□□□□□ -2.22
NR2E3Q9Y5X4 AC090897.1-201ENST00000580909 226 ntBASIC1.17□□□□□ -2.22
NR2E3Q9Y5X4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.17□□□□□ -2.22
NR2E3Q9Y5X4 MIR1-1-201ENST00000362147 71 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 Y_RNA.95-201ENST00000363079 95 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 SNORD114-23-201ENST00000363536 72 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 MIR125B2-201ENST00000385128 89 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 MIR1827-201ENST00000408549 66 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 AC004941.2-201ENST00000427009 228 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 MTATP8P2-201ENST00000435212 202 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.16□□□□□ -2.22
NR2E3Q9Y5X4 RNA5SP121-201ENST00000516537 101 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms