Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MIR643-201ENST00000385267 97 ntBASIC-0.12□□□□□ -2.43
NPC1L1Q9UHC9 AL359881.1-201ENST00000602916 267 ntBASIC-0.12□□□□□ -2.43
NPC1L1Q9UHC9 AC105081.1-201ENST00000617727 106 ntBASIC-0.12□□□□□ -2.43
NPC1L1Q9UHC9 AL162376.1-201ENST00000624117 175 ntBASIC-0.12□□□□□ -2.43
NPC1L1Q9UHC9 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.13□□□□□ -2.43
NPC1L1Q9UHC9 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.13□□□□□ -2.43
NPC1L1Q9UHC9 MIR145-201ENST00000384967 88 ntBASIC-0.13□□□□□ -2.43
NPC1L1Q9UHC9 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.13□□□□□ -2.43
NPC1L1Q9UHC9 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.13□□□□□ -2.43
NPC1L1Q9UHC9 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 RNU6-239P-201ENST00000390990 99 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 RNU7-48P-201ENST00000458875 63 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 RNU7-104P-201ENST00000459398 79 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 AC104692.1-201ENST00000472406 90 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 AC108676.2-201ENST00000605225 163 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 MIR499B-201ENST00000636498 73 ntBASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.14□□□□□ -2.43
NPC1L1Q9UHC9 RNU6-449P-201ENST00000383914 107 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 RNU6-196P-201ENST00000384315 107 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 SNORD37.2-201ENST00000391075 66 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 MIR548I2-201ENST00000408348 149 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 RNU7-123P-201ENST00000515911 60 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 RNU7-161P-201ENST00000517289 62 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 MIR4500-201ENST00000579472 76 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 MIR4752-201ENST00000579672 72 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 MIR4645-201ENST00000583158 77 ntBASIC-0.15□□□□□ -2.43
NPC1L1Q9UHC9 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 MIR593-201ENST00000384856 100 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 RNU6-269P-201ENST00000391077 97 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 RNU6-588P-201ENST00000410281 105 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 AC097635.1-201ENST00000450678 155 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 AC009779.6-201ENST00000603972 165 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 AC072026.1-201ENST00000605023 201 ntBASIC-0.16□□□□□ -2.43
NPC1L1Q9UHC9 MIR101-1-201ENST00000362265 75 ntBASIC-0.17□□□□□ -2.44
NPC1L1Q9UHC9 RNA5SP403-201ENST00000363598 108 ntBASIC-0.17□□□□□ -2.44
NPC1L1Q9UHC9 RNU6-1321P-201ENST00000390905 107 ntBASIC-0.17□□□□□ -2.44
NPC1L1Q9UHC9 SNORD41.1-201ENST00000391000 69 ntBASIC-0.17□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.17□□□□□ -2.44
NPC1L1Q9UHC9 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.17□□□□□ -2.44
NPC1L1Q9UHC9 AP001362.1-201ENST00000625165 124 ntBASIC-0.17□□□□□ -2.44
NPC1L1Q9UHC9 RNU6-47P-201ENST00000383866 107 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 MIR206-201ENST00000384872 86 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 MIR599-201ENST00000385069 95 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 AL603914.1-201ENST00000401964 204 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 HMGN2P22-201ENST00000427588 175 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 RNU7-159P-201ENST00000459284 62 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 RNU1-29P-201ENST00000606574 126 ntBASIC-0.18□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 MTND3P2-201ENST00000438452 342 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 MIR548AD-201ENST00000584780 82 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 RNU6-509P-201ENST00000363519 107 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 RNU4-84P-201ENST00000364200 139 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 RNU6-865P-201ENST00000364772 107 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 RNU7-74P-201ENST00000459104 62 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 RNU7-2P-201ENST00000516096 62 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 RNU2-60P-201ENST00000517290 128 ntBASIC-0.19□□□□□ -2.44
NPC1L1Q9UHC9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.2□□□□□ -2.44
NPC1L1Q9UHC9 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.2□□□□□ -2.44
NPC1L1Q9UHC9 RNU7-121P-201ENST00000516604 62 ntBASIC-0.2□□□□□ -2.44
NPC1L1Q9UHC9 AL137067.1-201ENST00000615933 120 ntBASIC-0.2□□□□□ -2.44
NPC1L1Q9UHC9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 MIR519A1-201ENST00000385257 85 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 MIR501-201ENST00000390204 84 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 MIR1270-201ENST00000459320 83 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 TRAJ51-201ENST00000504127 63 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 MIR4503-201ENST00000582187 83 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 AC096720.1-201ENST00000604441 183 ntBASIC-0.21□□□□□ -2.44
NPC1L1Q9UHC9 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.22□□□□□ -2.45
NPC1L1Q9UHC9 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.22□□□□□ -2.45
NPC1L1Q9UHC9 RNA5SP331-201ENST00000364986 107 ntBASIC-0.22□□□□□ -2.45
NPC1L1Q9UHC9 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.22□□□□□ -2.45
NPC1L1Q9UHC9 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.22□□□□□ -2.45
NPC1L1Q9UHC9 SNORD115-35-201ENST00000365122 82 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 RNU6-46P-201ENST00000383860 107 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 SNORA75.1-201ENST00000391130 148 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 MIR548H2-201ENST00000408874 88 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 AC130289.1-201ENST00000577321 73 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 uc_338.28-201ENST00000612082 187 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 SNORA70.25-201ENST00000612741 95 ntBASIC-0.23□□□□□ -2.45
NPC1L1Q9UHC9 RNU6-170P-201ENST00000362832 104 ntBASIC-0.24□□□□□ -2.45
NPC1L1Q9UHC9 RNU6-309P-201ENST00000364573 106 ntBASIC-0.24□□□□□ -2.45
NPC1L1Q9UHC9 RNU6-571P-201ENST00000384128 107 ntBASIC-0.24□□□□□ -2.45
NPC1L1Q9UHC9 RNU6-929P-201ENST00000384429 107 ntBASIC-0.24□□□□□ -2.45
NPC1L1Q9UHC9 AC006210.1-201ENST00000424882 111 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 230 ms