Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MIR34C-201ENST00000384831 77 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 SNORA19.1-201ENST00000410656 129 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 SCARNA23-201ENST00000516060 130 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 RNA5SP404-201ENST00000517118 132 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 AP001318.4-201ENST00000616637 121 ntBASIC1.2□□□□□ -2.22
DKK3Q9UBP4 SNORD114-27-201ENST00000363766 70 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
DKK3Q9UBP4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
DKK3Q9UBP4 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 RNU7-185P-201ENST00000459215 60 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 snoU13.21-201ENST00000459368 105 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 AC138749.4-201ENST00000563970 127 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 AC096720.1-201ENST00000604441 183 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
DKK3Q9UBP4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
DKK3Q9UBP4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
DKK3Q9UBP4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
DKK3Q9UBP4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 SNORD45B-201ENST00000364617 72 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 RNU1-36P-201ENST00000365130 165 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 SNORD38.2-201ENST00000384470 69 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 RNA5SP89-201ENST00000410300 108 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 RPS26P5-201ENST00000418544 335 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 AC023827.1-201ENST00000569247 97 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 MIR4491-201ENST00000581087 68 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 MIR4439-201ENST00000583746 80 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.18□□□□□ -2.22
DKK3Q9UBP4 HSBP1P2-201ENST00000299671 229 ntBASIC1.17□□□□□ -2.22
DKK3Q9UBP4 Y_RNA.68-201ENST00000362881 102 ntBASIC1.17□□□□□ -2.22
DKK3Q9UBP4 MIR19B1-201ENST00000384829 87 ntBASIC1.17□□□□□ -2.22
DKK3Q9UBP4 Y_RNA.588-201ENST00000391254 102 ntBASIC1.17□□□□□ -2.22
DKK3Q9UBP4 SNORD93-201ENST00000408813 74 ntBASIC1.17□□□□□ -2.22
DKK3Q9UBP4 SNORD83.1-201ENST00000411362 77 ntBASIC1.17□□□□□ -2.22
DKK3Q9UBP4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.17□□□□□ -2.22
DKK3Q9UBP4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
DKK3Q9UBP4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
DKK3Q9UBP4 AC023934.1-201ENST00000574529 2389 ntBASIC1.16□□□□□ -2.22
DKK3Q9UBP4 Y_RNA.348-201ENST00000365403 103 ntBASIC1.16□□□□□ -2.22
DKK3Q9UBP4 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
DKK3Q9UBP4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.16□□□□□ -2.22
DKK3Q9UBP4 SNORA40.13-201ENST00000516379 120 ntBASIC1.16□□□□□ -2.22
DKK3Q9UBP4 MIR2052-201ENST00000636055 55 ntBASIC1.16□□□□□ -2.22
DKK3Q9UBP4 Y_RNA.119-201ENST00000363301 96 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 RNA5SP133-201ENST00000363368 119 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 MIR125B2-201ENST00000385128 89 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 MIR1257-201ENST00000408490 117 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 RNU6-109P-201ENST00000516364 107 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.677-201ENST00000516401 85 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 RNU6-184P-201ENST00000516514 107 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 U6.109-201ENST00000636749 87 ntBASIC1.15□□□□□ -2.23
DKK3Q9UBP4 RNU6-369P-201ENST00000362515 102 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 RNU6-170P-201ENST00000362832 104 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.95-201ENST00000363079 95 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.107-201ENST00000363190 121 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 RNA5SP457-201ENST00000363657 124 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 MIR548G-201ENST00000408442 89 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 AC004941.2-201ENST00000427009 228 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 MTATP8P2-201ENST00000435212 202 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.694-201ENST00000516677 117 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 MIR5000-201ENST00000577717 103 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 MIR4771-2-201ENST00000577758 74 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 MIR4771-1-201ENST00000582617 74 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 RNU6-90P-201ENST00000606352 106 ntBASIC1.14□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.13□□□□□ -2.23
DKK3Q9UBP4 RNU4-58P-201ENST00000363192 141 ntBASIC1.13□□□□□ -2.23
DKK3Q9UBP4 MIR193B-201ENST00000384907 83 ntBASIC1.13□□□□□ -2.23
DKK3Q9UBP4 RNU6-994P-201ENST00000410507 111 ntBASIC1.13□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.659-201ENST00000515994 113 ntBASIC1.13□□□□□ -2.23
DKK3Q9UBP4 RNU6-765P-201ENST00000516916 99 ntBASIC1.13□□□□□ -2.23
DKK3Q9UBP4 AC020891.4-201ENST00000605745 93 ntBASIC1.13□□□□□ -2.23
DKK3Q9UBP4 Y_RNA.173-201ENST00000363776 113 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 RNU6-905P-201ENST00000384434 107 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 MIR1827-201ENST00000408549 66 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 RNU4-83P-201ENST00000410863 133 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.12□□□□□ -2.23
DKK3Q9UBP4 MIR4676-201ENST00000583078 72 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 MIR4777-201ENST00000583710 86 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 AC012531.4-201ENST00000616509 177 ntBASIC1.12□□□□□ -2.23
DKK3Q9UBP4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.12□□□□□ -2.23
DKK3Q9UBP4 MIR1-1-201ENST00000362147 71 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 RNU6-640P-201ENST00000363693 105 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 RNU6-571P-201ENST00000384128 107 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 MIR200A-201ENST00000384875 90 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 SNRPGP12-201ENST00000449481 213 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 AC067940.1-201ENST00000458411 300 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 AC087343.1-201ENST00000477341 475 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 MIR4500-201ENST00000579472 76 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 AC090897.1-201ENST00000580909 226 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 SNORD92-201ENST00000585078 85 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 MIR8066-201ENST00000617280 78 ntBASIC1.11□□□□□ -2.23
DKK3Q9UBP4 AC091304.10-201ENST00000641554 121 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 281.7 ms