Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-360P-201ENST00000390944 104 ntBASIC2.15□□□□□ -2.07
ATG3Q9NT62 AC004965.1-201ENST00000413033 213 ntBASIC2.15□□□□□ -2.07
ATG3Q9NT62 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.15□□□□□ -2.07
ATG3Q9NT62 Y_RNA.119-201ENST00000363301 96 ntBASIC2.14□□□□□ -2.07
ATG3Q9NT62 RNU6-686P-201ENST00000364839 107 ntBASIC2.14□□□□□ -2.07
ATG3Q9NT62 RNU6-132P-201ENST00000383863 107 ntBASIC2.14□□□□□ -2.07
ATG3Q9NT62 SNORD41-201ENST00000386967 70 ntBASIC2.14□□□□□ -2.07
ATG3Q9NT62 RNU6-1108P-201ENST00000516308 104 ntBASIC2.14□□□□□ -2.07
ATG3Q9NT62 BX248123.2-201ENST00000606318 124 ntBASIC2.14□□□□□ -2.07
ATG3Q9NT62 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATG3Q9NT62 MIR30D-201ENST00000362283 70 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 SNORD36A-201ENST00000362874 73 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 RNU1-42P-201ENST00000364033 160 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 MIR516A2-201ENST00000384888 90 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 MIR516A1-201ENST00000385033 90 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 snoU13.25-201ENST00000458945 104 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 RNU6-75P-201ENST00000515944 104 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 uc_338.6-201ENST00000613544 171 ntBASIC2.13□□□□□ -2.07
ATG3Q9NT62 Y_RNA.355-201ENST00000365462 98 ntBASIC2.12□□□□□ -2.07
ATG3Q9NT62 RNU6-571P-201ENST00000384128 107 ntBASIC2.12□□□□□ -2.07
ATG3Q9NT62 AL161935.2-201ENST00000414627 60 ntBASIC2.12□□□□□ -2.07
ATG3Q9NT62 SNORA18.5-201ENST00000516616 101 ntBASIC2.12□□□□□ -2.07
ATG3Q9NT62 AL096861.1-201ENST00000610899 123 ntBASIC2.12□□□□□ -2.07
ATG3Q9NT62 AC008163.1-202ENST00000636004 2889 ntBASIC2.12□□□□□ -2.07
ATG3Q9NT62 SNORD48-201ENST00000364953 64 ntBASIC2.11□□□□□ -2.07
ATG3Q9NT62 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ATG3Q9NT62 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ATG3Q9NT62 SNORD90-201ENST00000391145 111 ntBASIC2.11□□□□□ -2.07
ATG3Q9NT62 HSPE1P24-201ENST00000450782 238 ntBASIC2.11□□□□□ -2.07
ATG3Q9NT62 SNORD111.1-201ENST00000516421 86 ntBASIC2.11□□□□□ -2.07
ATG3Q9NT62 MIR8074-201ENST00000615081 81 ntBASIC2.11□□□□□ -2.07
ATG3Q9NT62 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATG3Q9NT62 SNORA25.3-201ENST00000363205 127 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 SNORA25.9-201ENST00000365087 128 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 RNU6-811P-201ENST00000384069 107 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 MIR30A-201ENST00000385092 71 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 MIR520H-201ENST00000385126 88 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 RNU7-106P-201ENST00000459514 67 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 SNORA44.1-201ENST00000517031 108 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 MIR4484-201ENST00000582855 83 ntBASIC2.1□□□□□ -2.07
ATG3Q9NT62 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATG3Q9NT62 MIR635-201ENST00000384830 98 ntBASIC2.09□□□□□ -2.07
ATG3Q9NT62 RNU6-322P-201ENST00000516010 103 ntBASIC2.09□□□□□ -2.07
ATG3Q9NT62 RNU6-922P-201ENST00000516753 99 ntBASIC2.09□□□□□ -2.07
ATG3Q9NT62 RNU6-1015P-201ENST00000517121 99 ntBASIC2.09□□□□□ -2.07
ATG3Q9NT62 MIR3064-201ENST00000581130 66 ntBASIC2.09□□□□□ -2.07
ATG3Q9NT62 MIR4536-1-201ENST00000583537 88 ntBASIC2.09□□□□□ -2.07
ATG3Q9NT62 SNORA4-201ENST00000584302 138 ntBASIC2.09□□□□□ -2.07
ATG3Q9NT62 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
ATG3Q9NT62 RNU6-590P-201ENST00000365039 107 ntBASIC2.08□□□□□ -2.08
ATG3Q9NT62 Y_RNA.327-201ENST00000365201 102 ntBASIC2.08□□□□□ -2.08
ATG3Q9NT62 SNORA72.6-201ENST00000384520 129 ntBASIC2.08□□□□□ -2.08
ATG3Q9NT62 RNU6-205P-201ENST00000390858 107 ntBASIC2.08□□□□□ -2.08
ATG3Q9NT62 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.08□□□□□ -2.08
ATG3Q9NT62 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.08□□□□□ -2.08
ATG3Q9NT62 MIR664A-201ENST00000626086 82 ntBASIC2.08□□□□□ -2.08
ATG3Q9NT62 RNA5SP48-201ENST00000363969 126 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 Y_RNA.283-201ENST00000364798 112 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 RNU6-392P-201ENST00000364926 101 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 RNA5SP259-201ENST00000365541 109 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 JTBP1-201ENST00000441314 247 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 AC008834.1-201ENST00000511612 175 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 MIR3198-2-201ENST00000577868 80 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 SNORD53B-201ENST00000577887 78 ntBASIC2.07□□□□□ -2.08
ATG3Q9NT62 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ATG3Q9NT62 MIRLET7F1-201ENST00000362202 87 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 RNU6-411P-201ENST00000384451 107 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 MIR513A1-201ENST00000385138 129 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 RNU6-1254P-201ENST00000391266 104 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 RNU6-1165P-201ENST00000410119 107 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 AC245517.4-201ENST00000448601 281 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 FGF7P7-201ENST00000514120 227 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 RNU6-539P-201ENST00000516665 103 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 RNU6-448P-201ENST00000517052 107 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 MIR3122-201ENST00000577243 73 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 SNORA77B-201ENST00000578179 125 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 AC104996.3-201ENST00000590718 94 ntBASIC2.06□□□□□ -2.08
ATG3Q9NT62 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ATG3Q9NT62 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
ATG3Q9NT62 MIR1323-201ENST00000408090 73 ntBASIC2.05□□□□□ -2.08
ATG3Q9NT62 MIR1276-201ENST00000408707 83 ntBASIC2.05□□□□□ -2.08
ATG3Q9NT62 SNORA25.16-201ENST00000516741 121 ntBASIC2.05□□□□□ -2.08
ATG3Q9NT62 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
ATG3Q9NT62 RNU6-957P-201ENST00000363652 99 ntBASIC2.04□□□□□ -2.08
ATG3Q9NT62 RNU6-396P-201ENST00000365369 105 ntBASIC2.04□□□□□ -2.08
ATG3Q9NT62 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.04□□□□□ -2.08
ATG3Q9NT62 Y_RNA.660-201ENST00000516002 120 ntBASIC2.04□□□□□ -2.08
ATG3Q9NT62 RNU6-687P-201ENST00000516443 89 ntBASIC2.04□□□□□ -2.08
ATG3Q9NT62 RNU6-531P-201ENST00000516694 104 ntBASIC2.04□□□□□ -2.08
ATG3Q9NT62 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ATG3Q9NT62 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.04□□□□□ -2.08
ATG3Q9NT62 Y_RNA.491-201ENST00000384417 107 ntBASIC2.03□□□□□ -2.08
ATG3Q9NT62 RNU6-243P-201ENST00000391140 107 ntBASIC2.03□□□□□ -2.08
ATG3Q9NT62 Y_RNA.588-201ENST00000391254 102 ntBASIC2.03□□□□□ -2.08
ATG3Q9NT62 AP003716.2-201ENST00000528260 108 ntBASIC2.03□□□□□ -2.08
ATG3Q9NT62 MIR4491-201ENST00000581087 68 ntBASIC2.03□□□□□ -2.08
ATG3Q9NT62 MIR4264-201ENST00000583520 66 ntBASIC2.03□□□□□ -2.08
ATG3Q9NT62 MIR6516-201ENST00000630554 81 ntBASIC2.03□□□□□ -2.08
ATG3Q9NT62 Y_RNA.118-201ENST00000363300 101 ntBASIC2.02□□□□□ -2.09
ATG3Q9NT62 RNU7-62P-201ENST00000458856 62 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 256.2 ms