Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 AC243829.6-201ENST00000612652 106 ntBASIC0.31□□□□□ -2.36
Q9N2K0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.31□□□□□ -2.36
Q9N2K0 RNU6-865P-201ENST00000364772 107 ntBASIC0.3□□□□□ -2.36
Q9N2K0 RNU6-716P-201ENST00000365621 103 ntBASIC0.3□□□□□ -2.36
Q9N2K0 RNU6-1104P-201ENST00000384723 104 ntBASIC0.3□□□□□ -2.36
Q9N2K0 RNU2-59P-201ENST00000410482 191 ntBASIC0.3□□□□□ -2.36
Q9N2K0 RNA5SP227-201ENST00000516184 113 ntBASIC0.3□□□□□ -2.36
Q9N2K0 Y_RNA.198-201ENST00000364013 98 ntBASIC0.29□□□□□ -2.36
Q9N2K0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.29□□□□□ -2.36
Q9N2K0 AC244505.6-201ENST00000452829 130 ntBASIC0.29□□□□□ -2.36
Q9N2K0 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
Q9N2K0 MIR924-201ENST00000638017 53 ntBASIC0.29□□□□□ -2.36
Q9N2K0 SNORD115-19-201ENST00000363098 82 ntBASIC0.28□□□□□ -2.36
Q9N2K0 Y_RNA.115-201ENST00000363272 98 ntBASIC0.28□□□□□ -2.36
Q9N2K0 SNORD115-18-201ENST00000363293 82 ntBASIC0.28□□□□□ -2.36
Q9N2K0 SNORD115-17-201ENST00000364612 82 ntBASIC0.28□□□□□ -2.36
Q9N2K0 Y_RNA.258-201ENST00000364613 105 ntBASIC0.28□□□□□ -2.36
Q9N2K0 SNORD115-35-201ENST00000365122 82 ntBASIC0.28□□□□□ -2.36
Q9N2K0 Y_RNA.328-201ENST00000365208 113 ntBASIC0.28□□□□□ -2.36
Q9N2K0 RNU6-616P-201ENST00000384353 107 ntBASIC0.28□□□□□ -2.36
Q9N2K0 MIR548I2-201ENST00000408348 149 ntBASIC0.28□□□□□ -2.36
Q9N2K0 SNRPGP12-201ENST00000449481 213 ntBASIC0.28□□□□□ -2.36
Q9N2K0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.28□□□□□ -2.36
Q9N2K0 RNU7-6P-201ENST00000516845 62 ntBASIC0.28□□□□□ -2.36
Q9N2K0 RNA5SP330-201ENST00000517096 96 ntBASIC0.28□□□□□ -2.36
Q9N2K0 MIR8087-201ENST00000612745 78 ntBASIC0.28□□□□□ -2.36
Q9N2K0 TUG1_4.1-201ENST00000619464 181 ntBASIC0.28□□□□□ -2.36
Q9N2K0 AC244669.1-204ENST00000621564 178 ntBASIC0.28□□□□□ -2.36
Q9N2K0 AC021753.1-201ENST00000635724 168 ntBASIC0.28□□□□□ -2.36
Q9N2K0 Y_RNA.30-201ENST00000362572 97 ntBASIC0.27□□□□□ -2.37
Q9N2K0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.27□□□□□ -2.37
Q9N2K0 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
Q9N2K0 AL158147.1-201ENST00000443970 75 ntBASIC0.27□□□□□ -2.37
Q9N2K0 RNU6-848P-201ENST00000515948 107 ntBASIC0.27□□□□□ -2.37
Q9N2K0 RNU6-617P-201ENST00000516147 107 ntBASIC0.27□□□□□ -2.37
Q9N2K0 RNU6-473P-201ENST00000516164 107 ntBASIC0.27□□□□□ -2.37
Q9N2K0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.27□□□□□ -2.37
Q9N2K0 IGKV1-22-201ENST00000524313 326 ntBASIC0.27□□□□□ -2.37
Q9N2K0 MIR7107-201ENST00000611489 80 ntBASIC0.27□□□□□ -2.37
Q9N2K0 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
Q9N2K0 Y_RNA.127-201ENST00000363386 109 ntBASIC0.26□□□□□ -2.37
Q9N2K0 RNA5SP245-201ENST00000364239 121 ntBASIC0.26□□□□□ -2.37
Q9N2K0 Y_RNA.343-201ENST00000365354 112 ntBASIC0.26□□□□□ -2.37
Q9N2K0 MIR635-201ENST00000384830 98 ntBASIC0.26□□□□□ -2.37
Q9N2K0 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
Q9N2K0 MTND5P41-201ENST00000517498 206 ntBASIC0.26□□□□□ -2.37
Q9N2K0 AC087741.2-201ENST00000619415 172 ntBASIC0.26□□□□□ -2.37
Q9N2K0 MIR330-201ENST00000362196 94 ntBASIC0.25□□□□□ -2.37
Q9N2K0 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
Q9N2K0 SNORA63.5-201ENST00000363548 123 ntBASIC0.25□□□□□ -2.37
Q9N2K0 Y_RNA.170-201ENST00000363746 110 ntBASIC0.25□□□□□ -2.37
Q9N2K0 RNU7-200P-201ENST00000516105 62 ntBASIC0.25□□□□□ -2.37
Q9N2K0 MIR4500-201ENST00000579472 76 ntBASIC0.25□□□□□ -2.37
Q9N2K0 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
Q9N2K0 SNORD115-24-201ENST00000363528 82 ntBASIC0.24□□□□□ -2.37
Q9N2K0 RNY1P5-201ENST00000383890 115 ntBASIC0.24□□□□□ -2.37
Q9N2K0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
Q9N2K0 SNORD38.2-201ENST00000384470 69 ntBASIC0.24□□□□□ -2.37
Q9N2K0 MIR1263-201ENST00000408324 86 ntBASIC0.24□□□□□ -2.37
Q9N2K0 MIR1197-201ENST00000408818 88 ntBASIC0.24□□□□□ -2.37
Q9N2K0 MIR3668-201ENST00000582138 75 ntBASIC0.24□□□□□ -2.37
Q9N2K0 RNA5SP457-201ENST00000363657 124 ntBASIC0.23□□□□□ -2.37
Q9N2K0 AC097635.1-201ENST00000450678 155 ntBASIC0.23□□□□□ -2.37
Q9N2K0 RNU6-426P-201ENST00000516464 97 ntBASIC0.23□□□□□ -2.37
Q9N2K0 MIR376B-201ENST00000614515 100 ntBASIC0.23□□□□□ -2.37
Q9N2K0 AL109933.3-201ENST00000619095 188 ntBASIC0.23□□□□□ -2.37
Q9N2K0 Y_RNA.49-201ENST00000362714 112 ntBASIC0.22□□□□□ -2.37
Q9N2K0 Y_RNA.294-201ENST00000364916 102 ntBASIC0.22□□□□□ -2.37
Q9N2K0 RNU6-571P-201ENST00000384128 107 ntBASIC0.22□□□□□ -2.37
Q9N2K0 Y_RNA.528-201ENST00000384575 108 ntBASIC0.22□□□□□ -2.37
Q9N2K0 MIR519A1-201ENST00000385257 85 ntBASIC0.22□□□□□ -2.37
Q9N2K0 SNORA40-201ENST00000388090 126 ntBASIC0.22□□□□□ -2.37
Q9N2K0 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
Q9N2K0 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
Q9N2K0 Y_RNA.374-201ENST00000365606 101 ntBASIC0.21□□□□□ -2.38
Q9N2K0 RNU6-1307P-201ENST00000391012 103 ntBASIC0.21□□□□□ -2.38
Q9N2K0 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
Q9N2K0 SNORA62.5-201ENST00000516634 120 ntBASIC0.21□□□□□ -2.38
Q9N2K0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Q9N2K0 Y_RNA.85-201ENST00000363014 111 ntBASIC0.2□□□□□ -2.38
Q9N2K0 Y_RNA.360-201ENST00000365512 102 ntBASIC0.2□□□□□ -2.38
Q9N2K0 MT-TI-201ENST00000387365 69 ntBASIC0.2□□□□□ -2.38
Q9N2K0 MIR548L-201ENST00000408303 86 ntBASIC0.2□□□□□ -2.38
Q9N2K0 AC069271.1-201ENST00000445577 156 ntBASIC0.2□□□□□ -2.38
Q9N2K0 AC069113.3-201ENST00000521019 150 ntBASIC0.2□□□□□ -2.38
Q9N2K0 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
Q9N2K0 RNU6-170P-201ENST00000362832 104 ntBASIC0.19□□□□□ -2.38
Q9N2K0 RNA5SP403-201ENST00000363598 108 ntBASIC0.19□□□□□ -2.38
Q9N2K0 RNY4P6-201ENST00000363667 96 ntBASIC0.19□□□□□ -2.38
Q9N2K0 MIR539-201ENST00000365690 78 ntBASIC0.19□□□□□ -2.38
Q9N2K0 Y_RNA.568-201ENST00000384742 113 ntBASIC0.19□□□□□ -2.38
Q9N2K0 MIR548D2-201ENST00000384955 97 ntBASIC0.19□□□□□ -2.38
Q9N2K0 BX276092.1-201ENST00000427368 251 ntBASIC0.19□□□□□ -2.38
Q9N2K0 MTND4LP9-201ENST00000427694 174 ntBASIC0.19□□□□□ -2.38
Q9N2K0 TRAJ51-201ENST00000504127 63 ntBASIC0.19□□□□□ -2.38
Q9N2K0 RNU6-521P-201ENST00000516663 105 ntBASIC0.19□□□□□ -2.38
Q9N2K0 SNORA9.1-201ENST00000362412 131 ntBASIC0.18□□□□□ -2.38
Q9N2K0 SNORD58C-201ENST00000365223 64 ntBASIC0.18□□□□□ -2.38
Q9N2K0 MIR599-201ENST00000385069 95 ntBASIC0.18□□□□□ -2.38
Q9N2K0 RNU7-161P-201ENST00000517289 62 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms