Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 PCNPP3-201ENST00000393579 471 ntBASIC0.19□□□□□ -2.38
NXF3Q9H4D5 MTND5P41-201ENST00000517498 206 ntBASIC0.19□□□□□ -2.38
NXF3Q9H4D5 MIR3121-201ENST00000579680 77 ntBASIC0.19□□□□□ -2.38
NXF3Q9H4D5 MIR2909-201ENST00000617113 69 ntBASIC0.19□□□□□ -2.38
NXF3Q9H4D5 MIR6755-201ENST00000619993 66 ntBASIC0.19□□□□□ -2.38
NXF3Q9H4D5 AC244669.1-204ENST00000621564 178 ntBASIC0.19□□□□□ -2.38
NXF3Q9H4D5 AC091304.10-201ENST00000641554 121 ntBASIC0.19□□□□□ -2.38
NXF3Q9H4D5 Y_RNA.49-201ENST00000362714 112 ntBASIC0.18□□□□□ -2.38
NXF3Q9H4D5 RNA5SP62-201ENST00000363457 110 ntBASIC0.18□□□□□ -2.38
NXF3Q9H4D5 RNU6-616P-201ENST00000384353 107 ntBASIC0.18□□□□□ -2.38
NXF3Q9H4D5 SNORD77B-201ENST00000391112 67 ntBASIC0.18□□□□□ -2.38
NXF3Q9H4D5 RNA5SP227-201ENST00000516184 113 ntBASIC0.18□□□□□ -2.38
NXF3Q9H4D5 AL109933.3-201ENST00000619095 188 ntBASIC0.18□□□□□ -2.38
NXF3Q9H4D5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 MIR513C-201ENST00000401352 84 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 AC244505.6-201ENST00000452829 130 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 Y_RNA.692-201ENST00000516627 105 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 FTX_2.1-201ENST00000618816 94 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 TUG1_4.1-201ENST00000619464 181 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 AP001340.1-201ENST00000624405 217 ntBASIC0.17□□□□□ -2.38
NXF3Q9H4D5 Y_RNA.98-201ENST00000363109 102 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 RNU6-1126P-201ENST00000384002 107 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 RNU6-735P-201ENST00000410612 107 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 BX276092.1-201ENST00000427368 251 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 RNU7-48P-201ENST00000458875 63 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 RNU6-848P-201ENST00000515948 107 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 RNU6-617P-201ENST00000516147 107 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 RNU6-473P-201ENST00000516164 107 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 AC138869.1-201ENST00000568623 124 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 MIR3144-201ENST00000579460 79 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 MIR4500-201ENST00000579472 76 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 MIR548H5-201ENST00000580314 60 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 Y_RNA.773-201ENST00000607168 90 ntBASIC0.16□□□□□ -2.38
NXF3Q9H4D5 SNORD115-24-201ENST00000363528 82 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 RNU6-886P-201ENST00000384319 105 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 RNU7-2P-201ENST00000516096 62 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 RNU7-161P-201ENST00000517289 62 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 MIR548X2-201ENST00000579776 100 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 RNU7-10P-201ENST00000607194 63 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 AC087741.2-201ENST00000619415 172 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 AC021753.1-201ENST00000635724 168 ntBASIC0.15□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.114-201ENST00000363265 113 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.420-201ENST00000384043 110 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 RNA5SP63-201ENST00000391225 112 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 TRAJ51-201ENST00000504127 63 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 RNU7-6P-201ENST00000516845 62 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 RNU1-29P-201ENST00000606574 126 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 MIR376B-201ENST00000614515 100 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
NXF3Q9H4D5 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.127-201ENST00000363386 109 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 RNU6-647P-201ENST00000364243 107 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.221-201ENST00000364248 96 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.270-201ENST00000364693 104 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 SNORD115-35-201ENST00000365122 82 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.328-201ENST00000365208 113 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.400-201ENST00000383963 111 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 MIR34C-201ENST00000384831 77 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 MIR569-201ENST00000385228 96 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 MIR1263-201ENST00000408324 86 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 RNU7-129P-201ENST00000516128 62 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 RNU6-781P-201ENST00000516377 101 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 AP001328.1-201ENST00000528550 176 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 AP001362.1-201ENST00000625165 124 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 MIR1255B1-201ENST00000636325 63 ntBASIC0.13□□□□□ -2.39
NXF3Q9H4D5 SNORD115-19-201ENST00000363098 82 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 SNORD115-18-201ENST00000363293 82 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 SNORD115-17-201ENST00000364612 82 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.280-201ENST00000364765 112 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 MIR635-201ENST00000384830 98 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 MIR548I2-201ENST00000408348 149 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 RNU7-104P-201ENST00000459398 79 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 RN7SKP19-201ENST00000516016 252 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 RNU6-794P-201ENST00000517261 64 ntBASIC0.12□□□□□ -2.39
NXF3Q9H4D5 RNA5SP403-201ENST00000363598 108 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.215-201ENST00000364204 112 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 RNU6-726P-201ENST00000364680 107 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 RNU6-865P-201ENST00000364772 107 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 MIR760-201ENST00000390220 80 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 RNA5SP136-201ENST00000410906 107 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 RNU6-426P-201ENST00000516464 97 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 MIR3163-201ENST00000581592 73 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 SNORA70.25-201ENST00000612741 95 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 MIR499B-201ENST00000636498 73 ntBASIC0.11□□□□□ -2.39
NXF3Q9H4D5 SNORA9.1-201ENST00000362412 131 ntBASIC0.1□□□□□ -2.39
NXF3Q9H4D5 RNU6-235P-201ENST00000362644 107 ntBASIC0.1□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.85-201ENST00000363014 111 ntBASIC0.1□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.198-201ENST00000364013 98 ntBASIC0.1□□□□□ -2.39
NXF3Q9H4D5 MIR643-201ENST00000385267 97 ntBASIC0.1□□□□□ -2.39
NXF3Q9H4D5 AC097635.1-201ENST00000450678 155 ntBASIC0.1□□□□□ -2.39
NXF3Q9H4D5 Y_RNA.170-201ENST00000363746 110 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms