Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR22-201ENST00000362190 85 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU1-70P-201ENST00000362618 164 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.55-201ENST00000362797 102 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP264-201ENST00000363115 107 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-23P-201ENST00000363283 107 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA7.1-201ENST00000363750 139 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.186-201ENST00000363899 92 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP130-201ENST00000364431 114 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA71.2-201ENST00000364941 134 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP37-201ENST00000365420 130 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA62.4-201ENST00000365504 151 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.413-201ENST00000384007 102 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR129-1-201ENST00000384972 72 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR1287-201ENST00000408492 90 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RN7SKP123-201ENST00000410732 291 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORD83.1-201ENST00000411362 77 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 AC104333.2-201ENST00000422630 192 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 snoU13.28-201ENST00000459235 104 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 snoU13.21-201ENST00000459368 105 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RN7SL542P-201ENST00000467147 294 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.754-201ENST00000476024 102 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP519-201ENST00000516480 119 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA31.15-201ENST00000516771 132 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4716-201ENST00000579628 84 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4429-201ENST00000580105 73 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR5096-201ENST00000583713 70 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4639-201ENST00000584938 69 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR6867-201ENST00000610636 67 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.790-201ENST00000614282 102 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.782-201ENST00000614695 102 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR383-201ENST00000362257 73 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 U8.2-201ENST00000363156 134 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-934P-201ENST00000365154 107 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP151-201ENST00000365632 117 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU1-63P-201ENST00000383902 164 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-1279P-201ENST00000383917 103 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.457-201ENST00000384237 111 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.475-201ENST00000384345 101 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU1-44P-201ENST00000384453 163 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR634-201ENST00000385208 97 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA26.9-201ENST00000391322 122 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR938-201ENST00000401216 83 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR1185-1-201ENST00000408598 86 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP317-201ENST00000410176 116 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-628P-201ENST00000410675 107 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP311-201ENST00000411290 116 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 COX5BP7-201ENST00000414780 274 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 AC011998.1-201ENST00000433403 117 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 AL162151.2-201ENST00000448875 158 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU7-102P-201ENST00000458948 62 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 SCARNA10-201ENST00000459255 330 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RN7SL441P-201ENST00000492388 296 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU1-6P-201ENST00000516290 144 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP315-201ENST00000516340 116 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP49-201ENST00000516450 115 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP312-201ENST00000517068 116 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 AP002795.1-201ENST00000534879 84 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 AC015912.2-201ENST00000571053 181 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4771-2-201ENST00000577758 74 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4771-1-201ENST00000582617 74 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 AC091167.4-201ENST00000605079 184 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR6891-201ENST00000618788 93 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR5739-201ENST00000619803 80 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.781-201ENST00000620301 103 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 AC027335.2-201ENST00000624030 375 ntBASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
KRTAP4-4Q9BYR3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.63-201ENST00000362841 102 ntBASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU1-83P-201ENST00000363426 164 ntBASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORD35B-201ENST00000363660 87 ntBASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-737P-201ENST00000365370 107 ntBASIC0.78□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.349-201ENST00000365406 102 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 209.2 ms