Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MIR206-201ENST00000384872 86 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 MIR548A1-201ENST00000385041 97 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 SNORD105-201ENST00000386910 85 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 AL603908.1-201ENST00000406098 201 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 RNU7-102P-201ENST00000458948 62 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 RNU6-1333P-201ENST00000516162 93 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 AC138749.4-201ENST00000563970 127 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 MIR3613-201ENST00000579844 87 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 AC025166.1-201ENST00000612411 163 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 AL136317.1-201ENST00000612653 226 ntBASIC0.38□□□□□ -2.35
CDX2Q99626 RNU6-403P-201ENST00000363163 104 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 SNORA63.5-201ENST00000363548 123 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 RNY1P2-201ENST00000364820 117 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 Y_RNA.353-201ENST00000365440 108 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 RNU6-949P-201ENST00000384040 107 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 RNU6-429P-201ENST00000384582 108 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 SNORA19-201ENST00000384737 128 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 MIR520F-201ENST00000384824 87 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 MIR34C-201ENST00000384831 77 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 MIR520H-201ENST00000385126 88 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 MIR125B2-201ENST00000385128 89 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 SNORD93-201ENST00000408813 74 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 RNU6-994P-201ENST00000410507 111 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 RNU4-69P-201ENST00000410677 143 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 AL606753.1-201ENST00000427435 87 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 MTATP6P21-201ENST00000440681 189 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 RNU6-531P-201ENST00000516694 104 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 RNU7-156P-201ENST00000517214 74 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 MIR3152-201ENST00000579801 74 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 MIR3914-2-201ENST00000637339 95 ntBASIC0.37□□□□□ -2.35
CDX2Q99626 Y_RNA.42-201ENST00000362660 108 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RNA5SP133-201ENST00000363368 119 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 SNORD50.2-201ENST00000365465 70 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 Y_RNA.448-201ENST00000384185 108 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 MIR644A-201ENST00000385262 94 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RNU6-679P-201ENST00000391003 106 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RNA5SP237-201ENST00000410414 113 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RNU4-83P-201ENST00000410863 133 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 AC067940.1-201ENST00000458411 300 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RN7SKP12-201ENST00000516275 143 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RNU6-977P-201ENST00000516411 103 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 RNU6-521P-201ENST00000516663 105 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 AC011195.1-201ENST00000578177 177 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 MIR548Z-201ENST00000584743 97 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 MIR376B-201ENST00000614515 100 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 TUG1_4.1-201ENST00000619464 181 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 U6.109-201ENST00000636749 87 ntBASIC0.36□□□□□ -2.35
CDX2Q99626 MIR1-1-201ENST00000362147 71 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 Y_RNA.32-201ENST00000362589 110 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 Y_RNA.127-201ENST00000363386 109 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 Y_RNA.198-201ENST00000364013 98 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 RNU6-647P-201ENST00000364243 107 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 SNORD116-14-201ENST00000383894 92 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 SNORD116-17-201ENST00000383929 92 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 RNU6-80P-201ENST00000384195 107 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 SNORD116-15-201ENST00000384445 92 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 SNORA72.6-201ENST00000384520 129 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 SNORD116-19-201ENST00000384729 92 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 MIR573-201ENST00000384964 99 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 SNORA19.1-201ENST00000410656 129 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 SNORA7.5-201ENST00000410672 110 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 RNU4-61P-201ENST00000411243 107 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 MIR18B-201ENST00000454574 71 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.35□□□□□ -2.35
CDX2Q99626 Y_RNA.712-201ENST00000517011 92 ntBASIC0.35□□□□□ -2.35
CDX2Q99626 Y_RNA.35-201ENST00000362601 101 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 Y_RNA.119-201ENST00000363301 96 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 SNORD115-35-201ENST00000365122 82 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 Y_RNA.362-201ENST00000365518 110 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 RNU6-22P-201ENST00000384355 107 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 RNU6-291P-201ENST00000384720 107 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 MIR548D2-201ENST00000384955 97 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 MIR1257-201ENST00000408490 117 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 RNA5SP261-201ENST00000410536 106 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 BX276092.1-201ENST00000427368 251 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 TMSB4XP3-201ENST00000445144 114 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 Y_RNA.649-201ENST00000459077 103 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 RNU6-406P-201ENST00000516470 107 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 SNORA31.14-201ENST00000516728 116 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 RNU6-1006P-201ENST00000516998 103 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 MIR3612-201ENST00000579753 87 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 AC090897.1-201ENST00000580909 226 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 SNORD92-201ENST00000585078 85 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 MIR6082-201ENST00000613604 109 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 MIR6129-201ENST00000616087 109 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 AC132825.6-201ENST00000638861 357 ntBASIC0.34□□□□□ -2.36
CDX2Q99626 SNORA36.1-201ENST00000363424 132 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 MT-TF-201ENST00000387314 71 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 MIR759-201ENST00000390224 91 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 RNU6-1168P-201ENST00000390831 104 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 MIR938-201ENST00000401216 83 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.33□□□□□ -2.36
CDX2Q99626 RNU7-106P-201ENST00000459514 67 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 AC002350.1-201ENST00000490759 375 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 RNU7-2P-201ENST00000516096 62 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 MIR4500-201ENST00000579472 76 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.33□□□□□ -2.36
CDX2Q99626 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 213.6 ms