Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC012676.2-201ENST00000619258 186 ntBASIC1.26□□□□□ -2.21
HAPLN3Q96S86 Y_RNA.290-201ENST00000364879 114 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 MIR548G-201ENST00000408442 89 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 SNORD83.1-201ENST00000411362 77 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 AC023827.1-201ENST00000569247 97 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 MIR4491-201ENST00000581087 68 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 AC096720.1-201ENST00000604441 183 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 RNU6-86P-201ENST00000606534 107 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 MIR2052-201ENST00000636055 55 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 U6.109-201ENST00000636749 87 ntBASIC1.25□□□□□ -2.21
HAPLN3Q96S86 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
HAPLN3Q96S86 RNA5SP133-201ENST00000363368 119 ntBASIC1.24□□□□□ -2.21
HAPLN3Q96S86 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HAPLN3Q96S86 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.24□□□□□ -2.21
HAPLN3Q96S86 RNU6-162P-201ENST00000516228 103 ntBASIC1.24□□□□□ -2.21
HAPLN3Q96S86 AC090897.1-201ENST00000580909 226 ntBASIC1.24□□□□□ -2.21
HAPLN3Q96S86 AC020891.4-201ENST00000605745 93 ntBASIC1.24□□□□□ -2.21
HAPLN3Q96S86 AC106800.4-201ENST00000614905 153 ntBASIC1.24□□□□□ -2.21
HAPLN3Q96S86 MIR6734-201ENST00000621166 68 ntBASIC1.24□□□□□ -2.21
HAPLN3Q96S86 HSBP1P2-201ENST00000299671 229 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 Y_RNA.119-201ENST00000363301 96 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 Y_RNA.173-201ENST00000363776 113 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 RNU1-36P-201ENST00000365130 165 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 SNORD111-201ENST00000408139 94 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 RNU7-185P-201ENST00000459215 60 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 SNORA25.16-201ENST00000516741 121 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 MIR4500-201ENST00000579472 76 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 MIR4439-201ENST00000583746 80 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 RNU6-90P-201ENST00000606352 106 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 U7.3-201ENST00000616123 62 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 AC027335.2-201ENST00000624030 375 ntBASIC1.23□□□□□ -2.21
HAPLN3Q96S86 RNU6-934P-201ENST00000365154 107 ntBASIC1.22□□□□□ -2.21
HAPLN3Q96S86 MIR489-201ENST00000384923 84 ntBASIC1.22□□□□□ -2.21
HAPLN3Q96S86 SNORD93-201ENST00000408813 74 ntBASIC1.22□□□□□ -2.21
HAPLN3Q96S86 SPINT5P-201ENST00000448174 155 ntBASIC1.22□□□□□ -2.21
HAPLN3Q96S86 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.22□□□□□ -2.21
HAPLN3Q96S86 AC008163.1-202ENST00000636004 2889 ntBASIC1.22□□□□□ -2.21
HAPLN3Q96S86 AC023934.1-201ENST00000574529 2389 ntBASIC1.22□□□□□ -2.21
HAPLN3Q96S86 RNU6-369P-201ENST00000362515 102 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 Y_RNA.190-201ENST00000363964 101 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 RNU6-53P-201ENST00000365367 106 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 RNU6-813P-201ENST00000384691 107 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 Y_RNA.567-201ENST00000384736 106 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 AC002429.1-201ENST00000437672 148 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.21□□□□□ -2.22
HAPLN3Q96S86 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 RNU6-844P-201ENST00000517175 102 ntBASIC1.21□□□□□ -2.22
HAPLN3Q96S86 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.22
HAPLN3Q96S86 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
HAPLN3Q96S86 RNU6-1244P-201ENST00000363614 108 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 RNU6-294P-201ENST00000364999 102 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 MIR19B1-201ENST00000384829 87 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 RNU6-531P-201ENST00000516694 104 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 MTND5P40-201ENST00000559945 246 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 AC006254.2-201ENST00000603259 279 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 AC103810.7-201ENST00000607821 91 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.2□□□□□ -2.22
HAPLN3Q96S86 MIR26B-201ENST00000362251 77 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 SNORD114-22-201ENST00000365423 72 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 RNU6-887P-201ENST00000410660 100 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 RNU4-83P-201ENST00000410863 133 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 BX276092.1-201ENST00000427368 251 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 SNRPGP12-201ENST00000449481 213 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 Y_RNA.705-201ENST00000516862 110 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 AC019288.1-201ENST00000557918 224 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 MIR4771-2-201ENST00000577758 74 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 MIR4771-1-201ENST00000582617 74 ntBASIC1.19□□□□□ -2.22
HAPLN3Q96S86 RNU6-403P-201ENST00000363163 104 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 Y_RNA.220-201ENST00000364244 109 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 SNORA25.8-201ENST00000364831 128 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 SNORD58A-201ENST00000383875 65 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 SNORD38.2-201ENST00000384470 69 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 RPS26P5-201ENST00000418544 335 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 MIR8066-201ENST00000617280 78 ntBASIC1.18□□□□□ -2.22
HAPLN3Q96S86 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HAPLN3Q96S86 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HAPLN3Q96S86 MIR125B2-201ENST00000385128 89 ntBASIC1.17□□□□□ -2.22
HAPLN3Q96S86 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
HAPLN3Q96S86 RNU6-972P-201ENST00000391208 107 ntBASIC1.17□□□□□ -2.22
HAPLN3Q96S86 AC026421.1-201ENST00000519101 163 ntBASIC1.17□□□□□ -2.22
HAPLN3Q96S86 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
HAPLN3Q96S86 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HAPLN3Q96S86 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HAPLN3Q96S86 Y_RNA.13-201ENST00000362403 112 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 MIR181B2-201ENST00000385004 89 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 MIR1257-201ENST00000408490 117 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 RNU6-850P-201ENST00000516934 103 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 MIR4676-201ENST00000583078 72 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 AC013244.2-201ENST00000603396 103 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 MIR6082-201ENST00000613604 109 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 AC025521.1-201ENST00000621624 286 ntBASIC1.16□□□□□ -2.22
HAPLN3Q96S86 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
HAPLN3Q96S86 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 184.1 ms