Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MIR377-201ENST00000362145 69 ntBASIC1.29□□□□□ -2.2
ZNF48Q96MX3 RNU6-1065P-201ENST00000384513 106 ntBASIC1.29□□□□□ -2.2
ZNF48Q96MX3 MT-TF-201ENST00000387314 71 ntBASIC1.29□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.607-201ENST00000410597 98 ntBASIC1.29□□□□□ -2.2
ZNF48Q96MX3 RNU4-83P-201ENST00000410863 133 ntBASIC1.29□□□□□ -2.2
ZNF48Q96MX3 RPL30P7-201ENST00000479312 323 ntBASIC1.29□□□□□ -2.2
ZNF48Q96MX3 MIR4500-201ENST00000579472 76 ntBASIC1.29□□□□□ -2.2
ZNF48Q96MX3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
ZNF48Q96MX3 RNA5SP264-201ENST00000363115 107 ntBASIC1.28□□□□□ -2.2
ZNF48Q96MX3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.28□□□□□ -2.2
ZNF48Q96MX3 MIR1323-201ENST00000408090 73 ntBASIC1.28□□□□□ -2.2
ZNF48Q96MX3 AC087499.7-201ENST00000441958 109 ntBASIC1.28□□□□□ -2.2
ZNF48Q96MX3 RNU11-2P-201ENST00000516898 142 ntBASIC1.28□□□□□ -2.2
ZNF48Q96MX3 RNU6-850P-201ENST00000516934 103 ntBASIC1.28□□□□□ -2.2
ZNF48Q96MX3 SNORD53B-201ENST00000577887 78 ntBASIC1.28□□□□□ -2.2
ZNF48Q96MX3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.28□□□□□ -2.2
ZNF48Q96MX3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
ZNF48Q96MX3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
ZNF48Q96MX3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.27□□□□□ -2.21
ZNF48Q96MX3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
ZNF48Q96MX3 MIR103A2-201ENST00000362154 78 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 RNU6-654P-201ENST00000364373 107 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 RNU6-571P-201ENST00000384128 107 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 MIR1287-201ENST00000408492 90 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 RNU6-857P-201ENST00000515893 110 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 MIR8070-201ENST00000616510 88 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 MIR8066-201ENST00000617280 78 ntBASIC1.27□□□□□ -2.21
ZNF48Q96MX3 MIR337-201ENST00000362281 93 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 Y_RNA.244-201ENST00000364484 109 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 RNU6-580P-201ENST00000365159 107 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 RNU6-652P-201ENST00000365488 107 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 RNU6-524P-201ENST00000384270 107 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 MIR519C-201ENST00000385053 87 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 RNA5SP95-201ENST00000410319 137 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 RNU6-519P-201ENST00000410590 108 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
ZNF48Q96MX3 BX276092.1-201ENST00000427368 251 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 BX248123.2-201ENST00000606318 124 ntBASIC1.26□□□□□ -2.21
ZNF48Q96MX3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
ZNF48Q96MX3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.25□□□□□ -2.21
ZNF48Q96MX3 SNORA67.6-201ENST00000391093 99 ntBASIC1.25□□□□□ -2.21
ZNF48Q96MX3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.25□□□□□ -2.21
ZNF48Q96MX3 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
ZNF48Q96MX3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.25□□□□□ -2.21
ZNF48Q96MX3 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
ZNF48Q96MX3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
ZNF48Q96MX3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
ZNF48Q96MX3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.24□□□□□ -2.21
ZNF48Q96MX3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.24□□□□□ -2.21
ZNF48Q96MX3 RNU7-85P-201ENST00000458851 63 ntBASIC1.24□□□□□ -2.21
ZNF48Q96MX3 SNORD4B-201ENST00000459083 72 ntBASIC1.24□□□□□ -2.21
ZNF48Q96MX3 AC093729.1-201ENST00000513074 128 ntBASIC1.24□□□□□ -2.21
ZNF48Q96MX3 MIR3664-201ENST00000579074 99 ntBASIC1.24□□□□□ -2.21
ZNF48Q96MX3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
ZNF48Q96MX3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
ZNF48Q96MX3 RNU6-24P-201ENST00000384440 107 ntBASIC1.23□□□□□ -2.21
ZNF48Q96MX3 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
ZNF48Q96MX3 MIR18B-201ENST00000454574 71 ntBASIC1.23□□□□□ -2.21
ZNF48Q96MX3 AL512310.8-201ENST00000550183 120 ntBASIC1.23□□□□□ -2.21
ZNF48Q96MX3 MIR4491-201ENST00000581087 68 ntBASIC1.23□□□□□ -2.21
ZNF48Q96MX3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.22□□□□□ -2.21
ZNF48Q96MX3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 MIR517C-201ENST00000385103 95 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 Y_RNA.648-201ENST00000459455 110 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 RNU6-531P-201ENST00000516694 104 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 SNORA25.16-201ENST00000516741 121 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.22□□□□□ -2.21
ZNF48Q96MX3 AC140658.3-201ENST00000567603 271 ntBASIC1.22□□□□□ -2.21
ZNF48Q96MX3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
ZNF48Q96MX3 RNA5SP327-201ENST00000362494 101 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 SNORA7.1-201ENST00000363750 139 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 SNORD115-37-201ENST00000363768 82 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 RNU1-36P-201ENST00000365130 165 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 MIR1236-201ENST00000408340 102 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 SNORD93-201ENST00000408813 74 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 RNU7-153P-201ENST00000516455 62 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 RN7SKP88-201ENST00000516847 250 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 SNORA31.24-201ENST00000517232 57 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 MIR4421-201ENST00000578133 69 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 7SK.8-201ENST00000612110 250 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 7SK.11-201ENST00000615477 250 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 7SK.13-201ENST00000622040 250 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
ZNF48Q96MX3 SNORD36A-201ENST00000362874 73 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 RNU4-58P-201ENST00000363192 141 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 RNU4-32P-201ENST00000363404 141 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 RNU6-53P-201ENST00000365367 106 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 SNORA72.6-201ENST00000384520 129 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 MIR516A2-201ENST00000384888 90 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 MIR516A1-201ENST00000385033 90 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 MIR320A-201ENST00000385302 82 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.2□□□□□ -2.22
ZNF48Q96MX3 AL354695.1-201ENST00000427935 228 ntBASIC1.2□□□□□ -2.22
ZNF48Q96MX3 snoU13.11-201ENST00000459219 104 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 190.7 ms