Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC020891.4-201ENST00000605745 93 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 U6.109-201ENST00000636749 87 ntBASIC1.29□□□□□ -2.2
RTF1Q92541 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 RNU6-369P-201ENST00000362515 102 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 RNA5SP133-201ENST00000363368 119 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 SNORD38.1-201ENST00000363863 68 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 MIR1827-201ENST00000408549 66 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 FABP5P4-201ENST00000437203 171 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.28□□□□□ -2.2
RTF1Q92541 RNA5SP404-201ENST00000517118 132 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 MIR4676-201ENST00000583078 72 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.28□□□□□ -2.2
RTF1Q92541 AC096720.1-201ENST00000604441 183 ntBASIC1.28□□□□□ -2.2
RTF1Q92541 MIR450A1-201ENST00000362262 91 ntBASIC1.27□□□□□ -2.21
RTF1Q92541 Y_RNA.601-201ENST00000410500 113 ntBASIC1.27□□□□□ -2.21
RTF1Q92541 RNU4-83P-201ENST00000410863 133 ntBASIC1.27□□□□□ -2.21
RTF1Q92541 RNU6-1194P-201ENST00000516208 104 ntBASIC1.27□□□□□ -2.21
RTF1Q92541 Y_RNA.818-201ENST00000618813 71 ntBASIC1.27□□□□□ -2.21
RTF1Q92541 HSBP1P2-201ENST00000299671 229 ntBASIC1.26□□□□□ -2.21
RTF1Q92541 Y_RNA.119-201ENST00000363301 96 ntBASIC1.26□□□□□ -2.21
RTF1Q92541 MIR100-201ENST00000385259 80 ntBASIC1.26□□□□□ -2.21
RTF1Q92541 MIR938-201ENST00000401216 83 ntBASIC1.26□□□□□ -2.21
RTF1Q92541 RNU6-765P-201ENST00000516916 99 ntBASIC1.26□□□□□ -2.21
RTF1Q92541 RNU6-537P-201ENST00000517277 103 ntBASIC1.26□□□□□ -2.21
RTF1Q92541 SNORD92-201ENST00000585078 85 ntBASIC1.26□□□□□ -2.21
RTF1Q92541 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RTF1Q92541 RNU6-403P-201ENST00000363163 104 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 RNU4-58P-201ENST00000363192 141 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 Y_RNA.544-201ENST00000384650 113 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 AC015818.7-201ENST00000428754 109 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 AC087499.7-201ENST00000441958 109 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 OR2A41P-201ENST00000473586 105 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 RNU6-977P-201ENST00000516411 103 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 RNU6-1110P-201ENST00000516462 101 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 MIR4804-201ENST00000581683 73 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 AL136317.1-201ENST00000612653 226 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 MIR6082-201ENST00000613604 109 ntBASIC1.25□□□□□ -2.21
RTF1Q92541 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RTF1Q92541 RNA5SP325-201ENST00000363756 130 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 SNORD45B-201ENST00000364617 72 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 RNU6-32P-201ENST00000383948 107 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 RNU6-13P-201ENST00000384248 107 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 RNU6-12P-201ENST00000384604 107 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 RNU6-41P-201ENST00000384741 107 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 MIR590-201ENST00000385008 97 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 MIR532-201ENST00000385025 91 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 SNORA19.1-201ENST00000410656 129 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 U7.7-201ENST00000459276 60 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 RPS29P1-201ENST00000465274 159 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 RNU7-156P-201ENST00000517214 74 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 MIR3613-201ENST00000579844 87 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 RMST_2.1-201ENST00000617263 136 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 MIR8066-201ENST00000617280 78 ntBASIC1.24□□□□□ -2.21
RTF1Q92541 Y_RNA.247-201ENST00000364500 92 ntBASIC1.23□□□□□ -2.21
RTF1Q92541 Y_RNA.540-201ENST00000384638 111 ntBASIC1.23□□□□□ -2.21
RTF1Q92541 SCARNA23-201ENST00000516060 130 ntBASIC1.23□□□□□ -2.21
RTF1Q92541 SNORA25.16-201ENST00000516741 121 ntBASIC1.23□□□□□ -2.21
RTF1Q92541 MIR4439-201ENST00000583746 80 ntBASIC1.23□□□□□ -2.21
RTF1Q92541 MIR6857-201ENST00000613267 93 ntBASIC1.23□□□□□ -2.21
RTF1Q92541 MIR6515-201ENST00000619843 57 ntBASIC1.23□□□□□ -2.21
RTF1Q92541 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
RTF1Q92541 Y_RNA.13-201ENST00000362403 112 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 Y_RNA.42-201ENST00000362660 108 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 SNORD114-24-201ENST00000365029 72 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 RNU6-364P-201ENST00000384387 107 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 SNORA72.6-201ENST00000384520 129 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 MIR548G-201ENST00000408442 89 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 RNU7-56P-201ENST00000458744 62 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 SNORD124-201ENST00000459577 104 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 RNU6-531P-201ENST00000516694 104 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 MIR4500-201ENST00000579472 76 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 AC090897.1-201ENST00000580909 226 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 RNU6-90P-201ENST00000606352 106 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 MIR6779-201ENST00000617283 64 ntBASIC1.22□□□□□ -2.21
RTF1Q92541 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.22□□□□□ -2.21
RTF1Q92541 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RTF1Q92541 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
RTF1Q92541 Y_RNA.495-201ENST00000384435 112 ntBASIC1.21□□□□□ -2.22
RTF1Q92541 MIR942-201ENST00000401111 86 ntBASIC1.21□□□□□ -2.22
RTF1Q92541 Y_RNA.659-201ENST00000515994 113 ntBASIC1.21□□□□□ -2.22
RTF1Q92541 RNU6-158P-201ENST00000517104 100 ntBASIC1.21□□□□□ -2.22
RTF1Q92541 MIR3973-201ENST00000579824 107 ntBASIC1.21□□□□□ -2.22
RTF1Q92541 AC211469.2-201ENST00000605461 205 ntBASIC1.21□□□□□ -2.22
RTF1Q92541 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RTF1Q92541 MIR373-201ENST00000362273 69 ntBASIC1.2□□□□□ -2.22
RTF1Q92541 Y_RNA.93-201ENST00000363066 109 ntBASIC1.2□□□□□ -2.22
RTF1Q92541 RNU1-119P-201ENST00000391122 165 ntBASIC1.2□□□□□ -2.22
RTF1Q92541 MTND5P40-201ENST00000559945 246 ntBASIC1.2□□□□□ -2.22
RTF1Q92541 AC103810.9-201ENST00000606688 112 ntBASIC1.2□□□□□ -2.22
RTF1Q92541 Y_RNA.95-201ENST00000363079 95 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 RNU6-571P-201ENST00000384128 107 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 MIR520F-201ENST00000384824 87 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 AC004941.2-201ENST00000427009 228 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 SPINT5P-201ENST00000448174 155 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 SNRPGP12-201ENST00000449481 213 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 RNU7-102P-201ENST00000458948 62 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.19□□□□□ -2.22
RTF1Q92541 AP003327.1-201ENST00000529684 127 ntBASIC1.19□□□□□ -2.22
RTF1Q92541 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.19□□□□□ -2.22
RTF1Q92541 RNU6-170P-201ENST00000362832 104 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms