Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL356320.1-201ENST00000429616 163 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 MIR5194-201ENST00000582634 120 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 MTRNR2L2-201ENST00000604882 87 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 AC046143.2-201ENST00000609789 160 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.53□□□□□ -2
SCUBE3Q8IX30 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2.01
SCUBE3Q8IX30 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 MIR21-201ENST00000362134 72 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 MIR103A2-201ENST00000362154 78 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 SNORD45.1-201ENST00000363181 77 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 Y_RNA.443-201ENST00000384135 111 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 SNORD45A-201ENST00000384512 84 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 RNU7-185P-201ENST00000459215 60 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 RNA5SP458-201ENST00000516188 119 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 MIR514B-201ENST00000516774 80 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 AC015688.6-201ENST00000577737 104 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 AL627230.6-201ENST00000611129 280 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 MIR6082-201ENST00000613604 109 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 U6.100-201ENST00000636230 99 ntBASIC2.52□□□□□ -2.01
SCUBE3Q8IX30 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 MIR337-201ENST00000362281 93 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 Y_RNA.13-201ENST00000362403 112 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 SNORD114-30-201ENST00000364448 72 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 RNU1-52P-201ENST00000384190 164 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 RNU6-1054P-201ENST00000411293 104 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 Y_RNA.697-201ENST00000516776 113 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 U6.81-201ENST00000612550 106 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
SCUBE3Q8IX30 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.5□□□□□ -2.01
SCUBE3Q8IX30 SNORA24B-201ENST00000384176 131 ntBASIC2.5□□□□□ -2.01
SCUBE3Q8IX30 RNU6-439P-201ENST00000384188 106 ntBASIC2.5□□□□□ -2.01
SCUBE3Q8IX30 AC016717.2-201ENST00000609089 5141 ntBASIC2.5□□□□□ -2.01
SCUBE3Q8IX30 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SCUBE3Q8IX30 AC023934.1-201ENST00000574529 2389 ntBASIC2.5□□□□□ -2.01
SCUBE3Q8IX30 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SCUBE3Q8IX30 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 RNA5SP99-201ENST00000364020 114 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 SNORD115-22-201ENST00000364456 82 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 DEFA7P-201ENST00000382676 285 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 RNU6-1052P-201ENST00000411398 104 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 AC097635.1-201ENST00000450678 155 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 RNU6-719P-201ENST00000516671 104 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 RNU6-881P-201ENST00000516813 102 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 RNU6-765P-201ENST00000516916 99 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 SNORA77B-201ENST00000578179 125 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 AL353997.5-201ENST00000618886 171 ntBASIC2.49□□□□□ -2.01
SCUBE3Q8IX30 RNU6-824P-201ENST00000363724 104 ntBASIC2.48□□□□□ -2.01
SCUBE3Q8IX30 SNORA6-201ENST00000384033 151 ntBASIC2.48□□□□□ -2.01
SCUBE3Q8IX30 MIR1257-201ENST00000408490 117 ntBASIC2.48□□□□□ -2.01
SCUBE3Q8IX30 RNU6-935P-201ENST00000410371 100 ntBASIC2.48□□□□□ -2.01
SCUBE3Q8IX30 MIR2113-201ENST00000459007 91 ntBASIC2.48□□□□□ -2.01
SCUBE3Q8IX30 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
SCUBE3Q8IX30 MIR1273D-201ENST00000577266 86 ntBASIC2.48□□□□□ -2.01
SCUBE3Q8IX30 RNU6-1216P-201ENST00000362590 107 ntBASIC2.47□□□□□ -2.01
SCUBE3Q8IX30 SNORD114-1-201ENST00000362705 72 ntBASIC2.47□□□□□ -2.01
SCUBE3Q8IX30 SNORA67.1-201ENST00000364749 141 ntBASIC2.47□□□□□ -2.01
SCUBE3Q8IX30 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SCUBE3Q8IX30 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
SCUBE3Q8IX30 AC138907.6-201ENST00000568401 126 ntBASIC2.46□□□□□ -2.02
SCUBE3Q8IX30 AC138869.1-201ENST00000568623 124 ntBASIC2.46□□□□□ -2.02
SCUBE3Q8IX30 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.46□□□□□ -2.02
SCUBE3Q8IX30 AC103706.3-201ENST00000636297 85 ntBASIC2.46□□□□□ -2.02
SCUBE3Q8IX30 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SCUBE3Q8IX30 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 AL359851.1-201ENST00000569460 4997 ntBASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 RNA5SP276-201ENST00000362580 94 ntBASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 MIR599-201ENST00000385069 95 ntBASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 RNA5SP181-201ENST00000410246 98 ntBASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 AC055731.1-201ENST00000474387 401 ntBASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 SNORA31.11-201ENST00000516528 139 ntBASIC2.45□□□□□ -2.02
SCUBE3Q8IX30 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
SCUBE3Q8IX30 SNORD113.1-201ENST00000363280 73 ntBASIC2.44□□□□□ -2.02
SCUBE3Q8IX30 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SCUBE3Q8IX30 MIR451A-201ENST00000385059 72 ntBASIC2.44□□□□□ -2.02
SCUBE3Q8IX30 MIR7111-201ENST00000619751 72 ntBASIC2.44□□□□□ -2.02
SCUBE3Q8IX30 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.44□□□□□ -2.02
SCUBE3Q8IX30 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
SCUBE3Q8IX30 SNORD116-24-201ENST00000384549 92 ntBASIC2.43□□□□□ -2.02
SCUBE3Q8IX30 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
SCUBE3Q8IX30 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SCUBE3Q8IX30 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SCUBE3Q8IX30 snoU13.21-201ENST00000459368 105 ntBASIC2.43□□□□□ -2.02
SCUBE3Q8IX30 MIR4511-201ENST00000582784 87 ntBASIC2.43□□□□□ -2.02
SCUBE3Q8IX30 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.43□□□□□ -2.02
SCUBE3Q8IX30 MIR5007-201ENST00000583098 95 ntBASIC2.42□□□□□ -2.02
SCUBE3Q8IX30 MIR8074-201ENST00000615081 81 ntBASIC2.42□□□□□ -2.02
SCUBE3Q8IX30 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SCUBE3Q8IX30 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
SCUBE3Q8IX30 RNU6-1177P-201ENST00000391058 104 ntBASIC2.41□□□□□ -2.02
SCUBE3Q8IX30 U3.27-201ENST00000391237 200 ntBASIC2.41□□□□□ -2.02
SCUBE3Q8IX30 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.41□□□□□ -2.02
SCUBE3Q8IX30 AL773524.1-201ENST00000614065 229 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms