Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU6-1168P-201ENST00000390831 104 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-765P-201ENST00000516916 99 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 MIR4679-2-201ENST00000578358 77 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 AL353765.1-201ENST00000605514 183 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 Y_RNA.773-201ENST00000607168 90 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 AL365222.1-201ENST00000614661 98 ntBASIC0.92□□□□□ -2.26
KRT28Q7Z3Y7 RNY4P6-201ENST00000363667 96 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-1307P-201ENST00000391012 103 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-1194P-201ENST00000516208 104 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 SNORD33.1-201ENST00000516213 88 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 RNU6-479P-201ENST00000516348 105 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 AC138749.4-201ENST00000563970 127 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 AC008608.1-201ENST00000603910 127 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 MIR6082-201ENST00000613604 109 ntBASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
KRT28Q7Z3Y7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 RNA5SP499-201ENST00000363982 119 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.261-201ENST00000364631 102 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 RNA5SP205-201ENST00000364653 136 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 RNY1P2-201ENST00000364820 117 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 SNORD115-35-201ENST00000365122 82 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.344-201ENST00000365381 112 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 RNU6-1321P-201ENST00000390905 107 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 RNU7-2P-201ENST00000516096 62 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 AC090897.1-201ENST00000580909 226 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 AC243829.3-201ENST00000622177 108 ntBASIC0.9□□□□□ -2.27
KRT28Q7Z3Y7 RNA5SP133-201ENST00000363368 119 ntBASIC0.89□□□□□ -2.27
KRT28Q7Z3Y7 AC092628.1-201ENST00000436250 252 ntBASIC0.89□□□□□ -2.27
KRT28Q7Z3Y7 AP003327.1-201ENST00000529684 127 ntBASIC0.89□□□□□ -2.27
KRT28Q7Z3Y7 U6.109-201ENST00000636749 87 ntBASIC0.89□□□□□ -2.27
KRT28Q7Z3Y7 MIR573-201ENST00000384964 99 ntBASIC0.88□□□□□ -2.27
KRT28Q7Z3Y7 MIR605-201ENST00000385078 83 ntBASIC0.88□□□□□ -2.27
KRT28Q7Z3Y7 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.88□□□□□ -2.27
KRT28Q7Z3Y7 AC244098.3-201ENST00000424803 96 ntBASIC0.88□□□□□ -2.27
KRT28Q7Z3Y7 SNORA25.16-201ENST00000516741 121 ntBASIC0.88□□□□□ -2.27
KRT28Q7Z3Y7 MIR1255B1-201ENST00000636325 63 ntBASIC0.88□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.362-201ENST00000365518 110 ntBASIC0.87□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.448-201ENST00000384185 108 ntBASIC0.87□□□□□ -2.27
KRT28Q7Z3Y7 SNORD100-201ENST00000408573 76 ntBASIC0.87□□□□□ -2.27
KRT28Q7Z3Y7 RNA5SP222-201ENST00000411039 105 ntBASIC0.87□□□□□ -2.27
KRT28Q7Z3Y7 PSMC1P5-201ENST00000512850 177 ntBASIC0.87□□□□□ -2.27
KRT28Q7Z3Y7 RNU6-62P-201ENST00000516526 102 ntBASIC0.87□□□□□ -2.27
KRT28Q7Z3Y7 RNU6-363P-201ENST00000362895 105 ntBASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 RNU4-58P-201ENST00000363192 141 ntBASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 AL353813.1-201ENST00000440700 253 ntBASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 RNU7-48P-201ENST00000458875 63 ntBASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.649-201ENST00000459077 103 ntBASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 RNU6-448P-201ENST00000517052 107 ntBASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 AL627230.5-201ENST00000619807 58 ntBASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
KRT28Q7Z3Y7 RNU6-834P-201ENST00000362367 110 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.98-201ENST00000363109 102 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 RNU6-865P-201ENST00000364772 107 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 RNA5SP117-201ENST00000365294 118 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 RPL39P34-201ENST00000477141 156 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 RNA5SP285-201ENST00000516619 119 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 RNU6-531P-201ENST00000516694 104 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 AC007012.1-201ENST00000567192 175 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 AL670379.3-201ENST00000605040 251 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 AL035470.1-201ENST00000622571 220 ntBASIC0.85□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.119-201ENST00000363301 96 ntBASIC0.84□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.328-201ENST00000365208 113 ntBASIC0.84□□□□□ -2.27
KRT28Q7Z3Y7 MIR146A-201ENST00000385201 99 ntBASIC0.84□□□□□ -2.27
KRT28Q7Z3Y7 Y_RNA.697-201ENST00000516776 113 ntBASIC0.84□□□□□ -2.27
KRT28Q7Z3Y7 MIR3612-201ENST00000579753 87 ntBASIC0.84□□□□□ -2.27
KRT28Q7Z3Y7 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.84□□□□□ -2.27
KRT28Q7Z3Y7 MIR101-2-201ENST00000362195 79 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 RNU4-67P-201ENST00000364569 141 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-429P-201ENST00000384582 108 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 RNU2-51P-201ENST00000410708 197 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 AC002350.1-201ENST00000490759 375 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-521P-201ENST00000516663 105 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 MIR376B-201ENST00000614515 100 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 AP001362.1-201ENST00000625165 124 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 AL162726.3-218ENST00000636401 95 ntBASIC0.83□□□□□ -2.28
KRT28Q7Z3Y7 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 Y_RNA.281-201ENST00000364774 94 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 SNORA36.2-201ENST00000384004 127 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 MIR548A3-201ENST00000385297 97 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1018P-201ENST00000516577 106 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-229P-201ENST00000516614 102 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1006P-201ENST00000516998 103 ntBASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1313P-201ENST00000362622 102 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1144P-201ENST00000384247 104 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-1154P-201ENST00000391001 104 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-679P-201ENST00000391003 106 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-313P-201ENST00000516317 112 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 MIR4500-201ENST00000579472 76 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 AC096720.1-201ENST00000604441 183 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 uc_338.16-201ENST00000621804 95 ntBASIC0.81□□□□□ -2.28
KRT28Q7Z3Y7 RNU4-45P-201ENST00000365469 141 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 Y_RNA.507-201ENST00000384500 99 ntBASIC0.8□□□□□ -2.28
KRT28Q7Z3Y7 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 173.7 ms