Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU6-154P-201ENST00000384306 106 ntBASIC-0.77□□□□□ -2.53
ZNF404Q494X3 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.77□□□□□ -2.53
ZNF404Q494X3 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.77□□□□□ -2.53
ZNF404Q494X3 SNORA3B-201ENST00000391305 131 ntBASIC-0.77□□□□□ -2.53
ZNF404Q494X3 MTND5P20-201ENST00000448677 143 ntBASIC-0.77□□□□□ -2.53
ZNF404Q494X3 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.77□□□□□ -2.53
ZNF404Q494X3 MIR4460-201ENST00000577862 86 ntBASIC-0.77□□□□□ -2.53
ZNF404Q494X3 RNA5SP368-201ENST00000364298 116 ntBASIC-0.78□□□□□ -2.53
ZNF404Q494X3 RNU6-643P-201ENST00000384018 107 ntBASIC-0.78□□□□□ -2.53
ZNF404Q494X3 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.78□□□□□ -2.53
ZNF404Q494X3 RNU6-472P-201ENST00000384299 107 ntBASIC-0.78□□□□□ -2.53
ZNF404Q494X3 RNU7-2P-201ENST00000516096 62 ntBASIC-0.78□□□□□ -2.53
ZNF404Q494X3 MIR3681-201ENST00000580089 72 ntBASIC-0.78□□□□□ -2.53
ZNF404Q494X3 RNU2-4P-201ENST00000606190 192 ntBASIC-0.78□□□□□ -2.53
ZNF404Q494X3 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 MIR224-201ENST00000384889 81 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 MT-TY-201ENST00000387409 66 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 MT-TD-201ENST00000387419 68 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 MIR2113-201ENST00000459007 91 ntBASIC-0.79□□□□□ -2.54
ZNF404Q494X3 MIR335-201ENST00000362173 94 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 RNU6-900P-201ENST00000384498 102 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 SNORD77B-201ENST00000391112 67 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 RNA5SP169-201ENST00000517268 117 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 AC138907.4-201ENST00000570107 226 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 AC021443.1-201ENST00000604478 211 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 MIR376B-201ENST00000614515 100 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.8□□□□□ -2.54
ZNF404Q494X3 MIR6086-201ENST00000638065 55 ntBASIC-0.8□□□□□ -2.54
ZNF404Q494X3 MIR20A-201ENST00000362279 71 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 RNU6-474P-201ENST00000384243 107 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 RNU7-164P-201ENST00000459221 62 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 RNU7-123P-201ENST00000515911 60 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 RNU6-240P-201ENST00000516098 97 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 AC009779.6-201ENST00000603972 165 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.81□□□□□ -2.54
ZNF404Q494X3 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.82□□□□□ -2.54
ZNF404Q494X3 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.82□□□□□ -2.54
ZNF404Q494X3 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.82□□□□□ -2.54
ZNF404Q494X3 SNORD115-35-201ENST00000365122 82 ntBASIC-0.82□□□□□ -2.54
ZNF404Q494X3 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.82□□□□□ -2.54
ZNF404Q494X3 RNU6-850P-201ENST00000516934 103 ntBASIC-0.82□□□□□ -2.54
ZNF404Q494X3 SNORA51.5-201ENST00000384126 131 ntBASIC-0.83□□□□□ -2.54
ZNF404Q494X3 SNORD56B-201ENST00000384713 71 ntBASIC-0.83□□□□□ -2.54
ZNF404Q494X3 AC244090.1-201ENST00000441884 93 ntBASIC-0.83□□□□□ -2.54
ZNF404Q494X3 RNU6-287P-201ENST00000516230 98 ntBASIC-0.83□□□□□ -2.54
ZNF404Q494X3 AC007012.1-201ENST00000567192 175 ntBASIC-0.83□□□□□ -2.54
ZNF404Q494X3 MIR4280-201ENST00000582178 76 ntBASIC-0.83□□□□□ -2.54
ZNF404Q494X3 AC087741.2-201ENST00000619415 172 ntBASIC-0.83□□□□□ -2.54
ZNF404Q494X3 MIR516A2-201ENST00000384888 90 ntBASIC-0.84□□□□□ -2.54
ZNF404Q494X3 MIR516A1-201ENST00000385033 90 ntBASIC-0.84□□□□□ -2.54
ZNF404Q494X3 MIR204-201ENST00000385200 110 ntBASIC-0.84□□□□□ -2.54
ZNF404Q494X3 AC074198.2-201ENST00000508153 258 ntBASIC-0.84□□□□□ -2.54
ZNF404Q494X3 AC021146.6-201ENST00000514659 117 ntBASIC-0.84□□□□□ -2.54
ZNF404Q494X3 MIR4680-201ENST00000580906 66 ntBASIC-0.84□□□□□ -2.54
ZNF404Q494X3 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 MT-TQ-201ENST00000387372 72 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 AC022028.1-201ENST00000412054 408 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 MTATP6P21-201ENST00000440681 189 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 AL445193.1-201ENST00000441183 141 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 AP000676.1-201ENST00000533307 52 ntBASIC-0.85□□□□□ -2.55
ZNF404Q494X3 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 RNU6-616P-201ENST00000384353 107 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 RNU6-901P-201ENST00000384593 106 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 RNU6-713P-201ENST00000384761 107 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 SNORA13-201ENST00000458790 133 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 AP001328.1-201ENST00000528550 176 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 MIR548S-201ENST00000581352 82 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 MIR6851-201ENST00000617060 67 ntBASIC-0.86□□□□□ -2.55
ZNF404Q494X3 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 RNU6-275P-201ENST00000364910 107 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 MIR652-201ENST00000385278 98 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 RNU7-55P-201ENST00000459426 62 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 RNA5SP476-201ENST00000516613 103 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 MIR4643-201ENST00000577473 78 ntBASIC-0.87□□□□□ -2.55
ZNF404Q494X3 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 SNORD114-15-201ENST00000364687 72 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.88□□□□□ -2.55
ZNF404Q494X3 MIR34C-201ENST00000384831 77 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms