Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR4771-2-201ENST00000577758 74 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 MIR4500-201ENST00000579472 76 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 AC090897.1-201ENST00000580909 226 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 MIR4771-1-201ENST00000582617 74 ntBASIC1.45□□□□□ -2.18
HERVK_113P62684 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HERVK_113P62684 Y_RNA.467-201ENST00000384297 102 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 RNU6-644P-201ENST00000391155 98 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 AC004941.2-201ENST00000427009 228 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 RNU7-185P-201ENST00000459215 60 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 RNU7-61P-201ENST00000515897 61 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 MIR5582-201ENST00000579697 68 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 RNU6-90P-201ENST00000606352 106 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 AC106800.4-201ENST00000614905 153 ntBASIC1.44□□□□□ -2.18
HERVK_113P62684 Y_RNA.119-201ENST00000363301 96 ntBASIC1.43□□□□□ -2.18
HERVK_113P62684 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
HERVK_113P62684 RNU1-36P-201ENST00000365130 165 ntBASIC1.43□□□□□ -2.18
HERVK_113P62684 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
HERVK_113P62684 MIR548G-201ENST00000408442 89 ntBASIC1.43□□□□□ -2.18
HERVK_113P62684 MIR4491-201ENST00000581087 68 ntBASIC1.43□□□□□ -2.18
HERVK_113P62684 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.43□□□□□ -2.18
HERVK_113P62684 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 RNU6-1255P-201ENST00000363434 112 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 RNU6-1131P-201ENST00000364955 107 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 RNU4-83P-201ENST00000410863 133 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 AC096949.1-201ENST00000412047 152 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 RNU6-162P-201ENST00000516228 103 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 RNU6-158P-201ENST00000517104 100 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 MIR4777-201ENST00000583710 86 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 RNU6-86P-201ENST00000606534 107 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
HERVK_113P62684 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
HERVK_113P62684 Y_RNA.43-201ENST00000362670 111 ntBASIC1.41□□□□□ -2.18
HERVK_113P62684 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HERVK_113P62684 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
HERVK_113P62684 RNU7-40P-201ENST00000516397 64 ntBASIC1.41□□□□□ -2.18
HERVK_113P62684 SNORA25.16-201ENST00000516741 121 ntBASIC1.41□□□□□ -2.18
HERVK_113P62684 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
HERVK_113P62684 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
HERVK_113P62684 RNU6-1163P-201ENST00000364516 107 ntBASIC1.4□□□□□ -2.19
HERVK_113P62684 MIR488-201ENST00000365739 83 ntBASIC1.4□□□□□ -2.19
HERVK_113P62684 Y_RNA.567-201ENST00000384736 106 ntBASIC1.4□□□□□ -2.19
HERVK_113P62684 RNU6-531P-201ENST00000516694 104 ntBASIC1.4□□□□□ -2.19
HERVK_113P62684 Y_RNA.220-201ENST00000364244 109 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 Y_RNA.342-201ENST00000365352 113 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 SNORA25-201ENST00000384384 134 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 MIR520E-201ENST00000384867 87 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 Y_RNA.588-201ENST00000391254 102 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 RPS26P5-201ENST00000418544 335 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.39□□□□□ -2.19
HERVK_113P62684 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.39□□□□□ -2.19
HERVK_113P62684 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 MALAT1.1-201ENST00000618249 95 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 MIR6767-201ENST00000637302 66 ntBASIC1.39□□□□□ -2.19
HERVK_113P62684 Y_RNA.96-201ENST00000363092 109 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 SNORD114-26-201ENST00000363543 72 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 RNU6-813P-201ENST00000384691 107 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 BX276092.1-201ENST00000427368 251 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 Y_RNA.705-201ENST00000516862 110 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 MIR4439-201ENST00000583746 80 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 AC020891.4-201ENST00000605745 93 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 U7.3-201ENST00000616123 62 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.38□□□□□ -2.19
HERVK_113P62684 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
HERVK_113P62684 Y_RNA.13-201ENST00000362403 112 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 RNU4-58P-201ENST00000363192 141 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 RNY1P7-201ENST00000384743 110 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 MIR100-201ENST00000385259 80 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 AC067940.1-201ENST00000458411 300 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 RPS29P1-201ENST00000465274 159 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 AC006254.2-201ENST00000603259 279 ntBASIC1.37□□□□□ -2.19
HERVK_113P62684 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
HERVK_113P62684 HSBP1P2-201ENST00000299671 229 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
HERVK_113P62684 RNU6-49P-201ENST00000384256 107 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 MIR125B2-201ENST00000385128 89 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 SNORD12-201ENST00000391002 90 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 MIR4676-201ENST00000583078 72 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 AC103810.7-201ENST00000607821 91 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 AC022709.1-201ENST00000615967 87 ntBASIC1.36□□□□□ -2.19
HERVK_113P62684 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HERVK_113P62684 Y_RNA.290-201ENST00000364879 114 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 Y_RNA.369-201ENST00000365568 117 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 RNU6-364P-201ENST00000384387 107 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 RNU6-972P-201ENST00000391208 107 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 RNU6-887P-201ENST00000410660 100 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 RNU6-977P-201ENST00000516411 103 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 RNU7-156P-201ENST00000517214 74 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 MIR6779-201ENST00000617283 64 ntBASIC1.35□□□□□ -2.19
HERVK_113P62684 MIR1-1-201ENST00000362147 71 ntBASIC1.34□□□□□ -2.19
HERVK_113P62684 Y_RNA.173-201ENST00000363776 113 ntBASIC1.34□□□□□ -2.19
HERVK_113P62684 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HERVK_113P62684 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.34□□□□□ -2.19
HERVK_113P62684 MIR4295-201ENST00000585286 85 ntBASIC1.34□□□□□ -2.19
HERVK_113P62684 AC013244.2-201ENST00000603396 103 ntBASIC1.34□□□□□ -2.19
HERVK_113P62684 MIR6082-201ENST00000613604 109 ntBASIC1.34□□□□□ -2.19
HERVK_113P62684 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
HERVK_113P62684 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HERVK_113P62684 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms