Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 SNORA67.6-201ENST00000391093 99 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 MIR1827-201ENST00000408549 66 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 FABP5P4-201ENST00000437203 171 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 RNU6-850P-201ENST00000516934 103 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 MIR5582-201ENST00000579697 68 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 MIR4804-201ENST00000581683 73 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 SNORD92-201ENST00000585078 85 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 AL136317.1-201ENST00000612653 226 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 U7.3-201ENST00000616123 62 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 MIR8066-201ENST00000617280 78 ntBASIC1.37□□□□□ -2.19
GFRA1P56159 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 Y_RNA.42-201ENST00000362660 108 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 RNU6-997P-201ENST00000384725 107 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 MIR520F-201ENST00000384824 87 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 BTF3P4-201ENST00000418852 495 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 AC013244.2-201ENST00000603396 103 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 AC103810.7-201ENST00000607821 91 ntBASIC1.36□□□□□ -2.19
GFRA1P56159 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
GFRA1P56159 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
GFRA1P56159 RNU6-369P-201ENST00000362515 102 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 RNU6-1255P-201ENST00000363434 112 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 RNU6-1131P-201ENST00000364955 107 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 Y_RNA.338-201ENST00000365320 114 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 Y_RNA.369-201ENST00000365568 117 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 MIR488-201ENST00000365739 83 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 RNU1-119P-201ENST00000391122 165 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 AP1B1P2-201ENST00000416196 106 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 RNU7-10P-201ENST00000607194 63 ntBASIC1.35□□□□□ -2.19
GFRA1P56159 Y_RNA.57-201ENST00000362806 113 ntBASIC1.34□□□□□ -2.19
GFRA1P56159 RNU7-102P-201ENST00000458948 62 ntBASIC1.34□□□□□ -2.19
GFRA1P56159 RNU6-162P-201ENST00000516228 103 ntBASIC1.34□□□□□ -2.19
GFRA1P56159 Y_RNA.697-201ENST00000516776 113 ntBASIC1.34□□□□□ -2.19
GFRA1P56159 MIR548H5-201ENST00000580314 60 ntBASIC1.34□□□□□ -2.19
GFRA1P56159 AL512598.1-201ENST00000610158 273 ntBASIC1.34□□□□□ -2.19
GFRA1P56159 SNORD116-10-201ENST00000363791 102 ntBASIC1.33□□□□□ -2.2
GFRA1P56159 Y_RNA.290-201ENST00000364879 114 ntBASIC1.33□□□□□ -2.2
GFRA1P56159 MIR942-201ENST00000401111 86 ntBASIC1.33□□□□□ -2.2
GFRA1P56159 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
GFRA1P56159 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
GFRA1P56159 AC006254.2-201ENST00000603259 279 ntBASIC1.33□□□□□ -2.2
GFRA1P56159 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.33□□□□□ -2.2
GFRA1P56159 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
GFRA1P56159 MIR181B2-201ENST00000385004 89 ntBASIC1.32□□□□□ -2.2
GFRA1P56159 SNORD100-201ENST00000408573 76 ntBASIC1.32□□□□□ -2.2
GFRA1P56159 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
GFRA1P56159 RNU7-56P-201ENST00000458744 62 ntBASIC1.32□□□□□ -2.2
GFRA1P56159 RNU6-1110P-201ENST00000516462 101 ntBASIC1.32□□□□□ -2.2
GFRA1P56159 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
GFRA1P56159 Y_RNA.56-201ENST00000362798 112 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 SNORD58A-201ENST00000383875 65 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 MIR635-201ENST00000384830 98 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 U7.7-201ENST00000459276 60 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 RNA5SP404-201ENST00000517118 132 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 AP003327.1-201ENST00000529684 127 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 MIR4498-201ENST00000577599 66 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 AL157834.3-201ENST00000615543 103 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 RMST_2.1-201ENST00000617263 136 ntBASIC1.31□□□□□ -2.2
GFRA1P56159 RNU6-49P-201ENST00000384256 107 ntBASIC1.3□□□□□ -2.2
GFRA1P56159 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
GFRA1P56159 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.3□□□□□ -2.2
GFRA1P56159 AL359821.1-201ENST00000605519 182 ntBASIC1.3□□□□□ -2.2
GFRA1P56159 snoU13.31-201ENST00000607291 104 ntBASIC1.3□□□□□ -2.2
GFRA1P56159 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
GFRA1P56159 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
GFRA1P56159 SNORD114-24-201ENST00000365029 72 ntBASIC1.29□□□□□ -2.2
GFRA1P56159 RNY1P7-201ENST00000384743 110 ntBASIC1.29□□□□□ -2.2
GFRA1P56159 SNORD124-201ENST00000459577 104 ntBASIC1.29□□□□□ -2.2
GFRA1P56159 AC023790.1-201ENST00000482174 347 ntBASIC1.29□□□□□ -2.2
GFRA1P56159 RNU1-92P-201ENST00000517017 135 ntBASIC1.29□□□□□ -2.2
GFRA1P56159 Y_RNA.536-201ENST00000384621 113 ntBASIC1.28□□□□□ -2.2
GFRA1P56159 MIR520H-201ENST00000385126 88 ntBASIC1.28□□□□□ -2.2
GFRA1P56159 MIR618-201ENST00000385287 98 ntBASIC1.28□□□□□ -2.2
GFRA1P56159 RNU6-1053P-201ENST00000515930 101 ntBASIC1.28□□□□□ -2.2
GFRA1P56159 RNU6-844P-201ENST00000517175 102 ntBASIC1.28□□□□□ -2.2
GFRA1P56159 AL513043.2-201ENST00000573941 143 ntBASIC1.28□□□□□ -2.2
GFRA1P56159 AC008608.1-201ENST00000603910 127 ntBASIC1.28□□□□□ -2.2
GFRA1P56159 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
GFRA1P56159 RNU6-294P-201ENST00000364999 102 ntBASIC1.27□□□□□ -2.21
GFRA1P56159 RNU6-535P-201ENST00000384722 107 ntBASIC1.27□□□□□ -2.21
GFRA1P56159 SNORD63B-201ENST00000411005 70 ntBASIC1.27□□□□□ -2.21
GFRA1P56159 RNU6-448P-201ENST00000517052 107 ntBASIC1.27□□□□□ -2.21
GFRA1P56159 MIR4421-201ENST00000578133 69 ntBASIC1.27□□□□□ -2.21
GFRA1P56159 AC025521.1-201ENST00000621624 286 ntBASIC1.27□□□□□ -2.21
GFRA1P56159 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
GFRA1P56159 MIR516A2-201ENST00000384888 90 ntBASIC1.26□□□□□ -2.21
GFRA1P56159 MIR516A1-201ENST00000385033 90 ntBASIC1.26□□□□□ -2.21
GFRA1P56159 SNORD105-201ENST00000386910 85 ntBASIC1.26□□□□□ -2.21
GFRA1P56159 RNU6-1254P-201ENST00000391266 104 ntBASIC1.26□□□□□ -2.21
GFRA1P56159 RNU6-291P-201ENST00000384720 107 ntBASIC1.25□□□□□ -2.21
GFRA1P56159 RNU6-243P-201ENST00000391140 107 ntBASIC1.25□□□□□ -2.21
GFRA1P56159 TRAJ51-201ENST00000504127 63 ntBASIC1.25□□□□□ -2.21
GFRA1P56159 AC138907.6-201ENST00000568401 126 ntBASIC1.25□□□□□ -2.21
GFRA1P56159 AC138869.1-201ENST00000568623 124 ntBASIC1.25□□□□□ -2.21
GFRA1P56159 SNORA7.1-201ENST00000363750 139 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms