Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 SNORD77B-201ENST00000391112 67 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 BX276092.1-201ENST00000427368 251 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 AP001362.1-201ENST00000625165 124 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 MIR1295B-201ENST00000636144 60 ntBASIC-0.23□□□□□ -2.45
SHMT2P34897 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU6-865P-201ENST00000364772 107 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 SNORA20.1-201ENST00000364790 130 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 MIR106A-201ENST00000384870 81 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 MIR519A1-201ENST00000385257 85 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 AL118496.2-201ENST00000448300 230 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU7-2P-201ENST00000516096 62 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNU6-327P-201ENST00000516270 127 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 MIR3658-201ENST00000636291 56 ntBASIC-0.24□□□□□ -2.45
SHMT2P34897 RNA5SP257-201ENST00000363023 116 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 MIR548I2-201ENST00000408348 149 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 AC104692.1-201ENST00000472406 90 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.25□□□□□ -2.45
SHMT2P34897 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.25□□□□□ -2.45
SHMT2P34897 MIR655-201ENST00000362159 97 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 RNU6-239P-201ENST00000390990 99 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 MIR876-201ENST00000401147 81 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 AC006210.1-201ENST00000424882 111 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 SNORD4A-201ENST00000459174 72 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 RNU7-121P-201ENST00000516604 62 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 RNY4P20-201ENST00000516678 93 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 AC022559.1-201ENST00000520905 205 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 AC009779.6-201ENST00000603972 165 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 U4.1-201ENST00000620349 87 ntBASIC-0.26□□□□□ -2.45
SHMT2P34897 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.26□□□□□ -2.45
SHMT2P34897 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU4-84P-201ENST00000364200 139 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU6-309P-201ENST00000364573 106 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU6-616P-201ENST00000384353 107 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 AL603914.1-201ENST00000401964 204 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 SNORD63B-201ENST00000411005 70 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 RNA5SP484-201ENST00000458857 111 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 NAMPTP3-201ENST00000569273 224 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 MIR376B-201ENST00000614515 100 ntBASIC-0.27□□□□□ -2.45
SHMT2P34897 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 SNORA75.1-201ENST00000391130 148 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 SNORD110-201ENST00000408189 75 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 RNU7-195P-201ENST00000458793 62 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 AC130289.1-201ENST00000577321 73 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 MIR3920-201ENST00000581751 86 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 AC108081.1-201ENST00000604358 221 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 MIR6514-201ENST00000622549 70 ntBASIC-0.28□□□□□ -2.45
SHMT2P34897 RNU6-170P-201ENST00000362832 104 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 SNORA18.1-201ENST00000363418 128 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 RNU6-509P-201ENST00000363519 107 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 SNORD18B-201ENST00000365659 72 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 CR383656.4-201ENST00000546909 122 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.29□□□□□ -2.46
SHMT2P34897 MIR6507-201ENST00000613630 70 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 RN7SL660P-201ENST00000614852 299 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 AL137067.1-201ENST00000615933 120 ntBASIC-0.29□□□□□ -2.46
SHMT2P34897 SNORD115-35-201ENST00000365122 82 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 SNORD114-12-201ENST00000365400 75 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 SNORD37.2-201ENST00000391075 66 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 AC244250.2-201ENST00000418731 148 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 RNU6-1045P-201ENST00000516321 107 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 RNU7-13P-201ENST00000516413 62 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.3□□□□□ -2.46
SHMT2P34897 MIR548AG2-201ENST00000581228 64 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 MIR4503-201ENST00000582187 83 ntBASIC-0.3□□□□□ -2.46
SHMT2P34897 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.3□□□□□ -2.46
SHMT2P34897 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-694P-201ENST00000364071 147 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-46P-201ENST00000383860 107 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNU6-571P-201ENST00000384128 107 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 MTND3P2-201ENST00000438452 342 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 AC109327.2-201ENST00000448339 378 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 SCARNA15.1-201ENST00000516384 125 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 AC072026.1-201ENST00000605023 201 ntBASIC-0.31□□□□□ -2.46
SHMT2P34897 RNA5SP205-201ENST00000364653 136 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 SNORA25.13-201ENST00000516395 103 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 MTND5P40-201ENST00000559945 246 ntBASIC-0.32□□□□□ -2.46
SHMT2P34897 MIR148A-201ENST00000362215 68 ntBASIC-0.33□□□□□ -2.46
SHMT2P34897 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.33□□□□□ -2.46
SHMT2P34897 RNU6-811P-201ENST00000384069 107 ntBASIC-0.33□□□□□ -2.46
SHMT2P34897 RNU6-524P-201ENST00000384270 107 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 351.3 ms