Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-49P-201ENST00000384256 107 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 MIR125B2-201ENST00000385128 89 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 MIR1323-201ENST00000408090 73 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 AC002429.1-201ENST00000437672 148 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 SNRPGP12-201ENST00000449481 213 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
COL6A2P12110 RNA5SP327-201ENST00000362494 101 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 Y_RNA.290-201ENST00000364879 114 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 RNU6-53P-201ENST00000365367 106 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 RNU6-571P-201ENST00000384128 107 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 SNORD26-201ENST00000384147 75 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 SNORA67.6-201ENST00000391093 99 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 AC006254.2-201ENST00000603259 279 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 AC020891.4-201ENST00000605745 93 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 U7.3-201ENST00000616123 62 ntBASIC1.41□□□□□ -2.18
COL6A2P12110 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
COL6A2P12110 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
COL6A2P12110 SNORD58A-201ENST00000383875 65 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
COL6A2P12110 RNU4-83P-201ENST00000410863 133 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 RNU7-40P-201ENST00000516397 64 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 SNORA25.16-201ENST00000516741 121 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 RNU6-765P-201ENST00000516916 99 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 RNU6-844P-201ENST00000517175 102 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 MIR4771-2-201ENST00000577758 74 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 MIR4771-1-201ENST00000582617 74 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 AL645939.4-201ENST00000604495 135 ntBASIC1.4□□□□□ -2.19
COL6A2P12110 RNU6-369P-201ENST00000362515 102 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 RNU6-1125P-201ENST00000363601 107 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 Y_RNA.224-201ENST00000364308 111 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 RNU6-480P-201ENST00000384332 107 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 RNU6-939P-201ENST00000384634 107 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 RNU6-531P-201ENST00000516694 104 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 MIR6082-201ENST00000613604 109 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 MIR8066-201ENST00000617280 78 ntBASIC1.39□□□□□ -2.19
COL6A2P12110 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
COL6A2P12110 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
COL6A2P12110 RNU6-403P-201ENST00000363163 104 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 RNU6-294P-201ENST00000364999 102 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 MIR19B1-201ENST00000384829 87 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 RNU7-95P-201ENST00000459222 64 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 RNU6-850P-201ENST00000516934 103 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 AC019288.1-201ENST00000557918 224 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 SNORD92-201ENST00000585078 85 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 AC103810.7-201ENST00000607821 91 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 AC027335.2-201ENST00000624030 375 ntBASIC1.38□□□□□ -2.19
COL6A2P12110 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
COL6A2P12110 SNORD116-10-201ENST00000363791 102 ntBASIC1.37□□□□□ -2.19
COL6A2P12110 RNY1P7-201ENST00000384743 110 ntBASIC1.37□□□□□ -2.19
COL6A2P12110 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.37□□□□□ -2.19
COL6A2P12110 RNU7-156P-201ENST00000517214 74 ntBASIC1.37□□□□□ -2.19
COL6A2P12110 Y_RNA.13-201ENST00000362403 112 ntBASIC1.36□□□□□ -2.19
COL6A2P12110 Y_RNA.42-201ENST00000362660 108 ntBASIC1.36□□□□□ -2.19
COL6A2P12110 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
COL6A2P12110 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
COL6A2P12110 RNU6-994P-201ENST00000410507 111 ntBASIC1.36□□□□□ -2.19
COL6A2P12110 BX276092.1-201ENST00000427368 251 ntBASIC1.36□□□□□ -2.19
COL6A2P12110 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
COL6A2P12110 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL6A2P12110 MIR1-1-201ENST00000362147 71 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 SNORA72.6-201ENST00000384520 129 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 MIR181B2-201ENST00000385004 89 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 MIR938-201ENST00000401216 83 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 MIR1276-201ENST00000408707 83 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 AC015818.7-201ENST00000428754 109 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 AC087499.7-201ENST00000441958 109 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 RNU6-162P-201ENST00000516228 103 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 MIR4804-201ENST00000581683 73 ntBASIC1.35□□□□□ -2.19
COL6A2P12110 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
COL6A2P12110 Y_RNA.190-201ENST00000363964 101 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 Y_RNA.327-201ENST00000365201 102 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 MIR1827-201ENST00000408549 66 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 RNU7-56P-201ENST00000458744 62 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 AC026421.1-201ENST00000519101 163 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 AC013244.2-201ENST00000603396 103 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 MIR6504-201ENST00000613520 61 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 MIR4679-1-201ENST00000637619 75 ntBASIC1.34□□□□□ -2.19
COL6A2P12110 Y_RNA.56-201ENST00000362798 112 ntBASIC1.33□□□□□ -2.2
COL6A2P12110 RNU6-392P-201ENST00000364926 101 ntBASIC1.33□□□□□ -2.2
COL6A2P12110 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL6A2P12110 Y_RNA.558-201ENST00000384685 113 ntBASIC1.33□□□□□ -2.2
COL6A2P12110 AC067940.1-201ENST00000458411 300 ntBASIC1.33□□□□□ -2.2
COL6A2P12110 RNU6-977P-201ENST00000516411 103 ntBASIC1.33□□□□□ -2.2
COL6A2P12110 RNU6-364P-201ENST00000384387 107 ntBASIC1.32□□□□□ -2.2
COL6A2P12110 SNORD100-201ENST00000408573 76 ntBASIC1.32□□□□□ -2.2
COL6A2P12110 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
COL6A2P12110 AL513043.2-201ENST00000573941 143 ntBASIC1.32□□□□□ -2.2
COL6A2P12110 MIR548H5-201ENST00000580314 60 ntBASIC1.32□□□□□ -2.2
COL6A2P12110 RNU7-10P-201ENST00000607194 63 ntBASIC1.32□□□□□ -2.2
COL6A2P12110 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.32□□□□□ -2.2
COL6A2P12110 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL6A2P12110 Y_RNA.57-201ENST00000362806 113 ntBASIC1.31□□□□□ -2.2
COL6A2P12110 MIR200A-201ENST00000384875 90 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms