Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 Y_RNA.94-201ENST00000363068 106 ntBASIC1.28□□□□□ -2.2
SNHG28P0DPA3 Y_RNA.221-201ENST00000364248 96 ntBASIC1.28□□□□□ -2.2
SNHG28P0DPA3 RNY1P2-201ENST00000364820 117 ntBASIC1.28□□□□□ -2.2
SNHG28P0DPA3 RNU6-652P-201ENST00000365488 107 ntBASIC1.28□□□□□ -2.2
SNHG28P0DPA3 RNU6-279P-201ENST00000391297 101 ntBASIC1.28□□□□□ -2.2
SNHG28P0DPA3 BX276092.1-201ENST00000427368 251 ntBASIC1.28□□□□□ -2.2
SNHG28P0DPA3 U6.109-201ENST00000636749 87 ntBASIC1.28□□□□□ -2.2
SNHG28P0DPA3 SNORD1A-201ENST00000364968 72 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-242P-201ENST00000384359 107 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-447P-201ENST00000410293 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-1118P-201ENST00000410382 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-1076P-201ENST00000410397 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNA5SP237-201ENST00000410414 113 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-355P-201ENST00000410427 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-791P-201ENST00000410467 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-705P-201ENST00000410601 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-1100P-201ENST00000410691 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-860P-201ENST00000410860 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-1217P-201ENST00000411276 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-785P-201ENST00000411324 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 SNRPGP12-201ENST00000449481 213 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 RNU6-857P-201ENST00000515893 110 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 MTND5P40-201ENST00000559945 246 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 MIR4500-201ENST00000579472 76 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 GHRLOS.1-201ENST00000610995 70 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 U6.90-201ENST00000614007 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 U6.70-201ENST00000620287 104 ntBASIC1.27□□□□□ -2.21
SNHG28P0DPA3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SNHG28P0DPA3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.96-201ENST00000363092 109 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.119-201ENST00000363301 96 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.168-201ENST00000363740 102 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 RNA5SP48-201ENST00000363969 126 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.588-201ENST00000391254 102 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 RNU6-1165P-201ENST00000410119 107 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.26□□□□□ -2.21
SNHG28P0DPA3 RNU6-850P-201ENST00000516934 103 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SNHG28P0DPA3 MIR6767-201ENST00000637302 66 ntBASIC1.26□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 MIR30A-201ENST00000385092 71 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 AC015818.7-201ENST00000428754 109 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 RNU7-106P-201ENST00000459514 67 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 SNORA25.16-201ENST00000516741 121 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 AC019176.1-201ENST00000518519 225 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 MIR8074-201ENST00000615081 81 ntBASIC1.25□□□□□ -2.21
SNHG28P0DPA3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.25□□□□□ -2.21
SNHG28P0DPA3 RNA5SP264-201ENST00000363115 107 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 RNU6-580P-201ENST00000365159 107 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 RNU6-396P-201ENST00000365369 105 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.363-201ENST00000365529 113 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SNHG28P0DPA3 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 SNORD4B-201ENST00000459083 72 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 snoU13.11-201ENST00000459219 104 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 AL133373.1-201ENST00000497098 94 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.24□□□□□ -2.21
SNHG28P0DPA3 AC133485.1-201ENST00000567176 124 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 MIR4491-201ENST00000581087 68 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 SNORA4-201ENST00000584302 138 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 AP000753.3-201ENST00000604083 169 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 MIR6504-201ENST00000613520 61 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 MIR8063-201ENST00000621930 81 ntBASIC1.24□□□□□ -2.21
SNHG28P0DPA3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SNHG28P0DPA3 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 Y_RNA.426-201ENST00000384068 113 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 MIR499A-201ENST00000384903 122 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 AL161932.1-201ENST00000437408 146 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 RNU7-62P-201ENST00000458856 62 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 RNU6-531P-201ENST00000516694 104 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 AC140658.3-201ENST00000567603 271 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 MIR4264-201ENST00000583520 66 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.23□□□□□ -2.21
SNHG28P0DPA3 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.23□□□□□ -2.21
SNHG28P0DPA3 SNORD36A-201ENST00000362874 73 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 RNU6-478P-201ENST00000363904 110 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 SNORA25.9-201ENST00000365087 128 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 MIR516A2-201ENST00000384888 90 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 MIR516A1-201ENST00000385033 90 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 MIR3664-201ENST00000579074 99 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 AC008163.1-202ENST00000636004 2889 ntBASIC1.22□□□□□ -2.21
SNHG28P0DPA3 MIR103A2-201ENST00000362154 78 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 Y_RNA.57-201ENST00000362806 113 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 MT-TN-201ENST00000387400 73 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 SNORD90-201ENST00000391145 111 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 Y_RNA.607-201ENST00000410597 98 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 RNA5SP247-201ENST00000411181 105 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 RNU6-75P-201ENST00000515944 104 ntBASIC1.21□□□□□ -2.22
SNHG28P0DPA3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SNHG28P0DPA3 RNU1-36P-201ENST00000365130 165 ntBASIC1.2□□□□□ -2.22
SNHG28P0DPA3 RNU6-132P-201ENST00000383863 107 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms