Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC132825.6-201ENST00000638861 357 ntBASIC-1.82□□□□□ -2.7
CXCL1P09341 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 RNU1-115P-201ENST00000365329 160 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 AC009779.6-201ENST00000603972 165 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 MIR6773-201ENST00000612812 74 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 AC084781.2-201ENST00000615568 161 ntBASIC-1.83□□□□□ -2.7
CXCL1P09341 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 SNORD27-201ENST00000363981 72 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 SNORD114-17-201ENST00000364699 75 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 RNU6-690P-201ENST00000365242 106 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 SNORA62.4-201ENST00000365504 151 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 HLA-S-202ENST00000425174 53 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 AC097510.1-201ENST00000510945 133 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 RNU6-561P-201ENST00000516222 102 ntBASIC-1.84□□□□□ -2.7
CXCL1P09341 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.85□□□□□ -2.71
CXCL1P09341 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.85□□□□□ -2.71
CXCL1P09341 RNU6-243P-201ENST00000391140 107 ntBASIC-1.85□□□□□ -2.71
CXCL1P09341 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.85□□□□□ -2.71
CXCL1P09341 SNORD58B-201ENST00000607313 66 ntBASIC-1.85□□□□□ -2.71
CXCL1P09341 AC103591.3-201ENST00000608684 209 ntBASIC-1.85□□□□□ -2.71
CXCL1P09341 MIR3688-2-201ENST00000636963 87 ntBASIC-1.85□□□□□ -2.71
CXCL1P09341 SNORD36A-201ENST00000362874 73 ntBASIC-1.86□□□□□ -2.71
CXCL1P09341 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.86□□□□□ -2.71
CXCL1P09341 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.86□□□□□ -2.71
CXCL1P09341 MIRLET7B-201ENST00000385140 83 ntBASIC-1.86□□□□□ -2.71
CXCL1P09341 RNA5SP461-201ENST00000516451 104 ntBASIC-1.86□□□□□ -2.71
CXCL1P09341 AC245505.1-201ENST00000556398 224 ntBASIC-1.86□□□□□ -2.71
CXCL1P09341 SNORD81.2-201ENST00000365153 76 ntBASIC-1.87□□□□□ -2.71
CXCL1P09341 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.87□□□□□ -2.71
CXCL1P09341 AL161932.1-201ENST00000437408 146 ntBASIC-1.87□□□□□ -2.71
CXCL1P09341 RNU6-479P-201ENST00000516348 105 ntBASIC-1.87□□□□□ -2.71
CXCL1P09341 AC026421.1-201ENST00000519101 163 ntBASIC-1.87□□□□□ -2.71
CXCL1P09341 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.88□□□□□ -2.71
CXCL1P09341 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.88□□□□□ -2.71
CXCL1P09341 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.88□□□□□ -2.71
CXCL1P09341 SNORD38.2-201ENST00000384470 69 ntBASIC-1.88□□□□□ -2.71
CXCL1P09341 RNA5SP236-201ENST00000516169 116 ntBASIC-1.88□□□□□ -2.71
CXCL1P09341 RNA5SP180-201ENST00000516181 101 ntBASIC-1.88□□□□□ -2.71
CXCL1P09341 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.88□□□□□ -2.71
CXCL1P09341 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.89□□□□□ -2.71
CXCL1P09341 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.89□□□□□ -2.71
CXCL1P09341 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.9□□□□□ -2.71
CXCL1P09341 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.9□□□□□ -2.71
CXCL1P09341 MIR29B1-201ENST00000385015 81 ntBASIC-1.9□□□□□ -2.71
CXCL1P09341 RNU6-381P-201ENST00000391259 108 ntBASIC-1.9□□□□□ -2.71
CXCL1P09341 U4.5-201ENST00000617137 123 ntBASIC-1.9□□□□□ -2.71
CXCL1P09341 AC104985.2-201ENST00000620598 500 ntBASIC-1.9□□□□□ -2.71
CXCL1P09341 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.9□□□□□ -2.71
CXCL1P09341 MIR198-201ENST00000637333 62 ntBASIC-1.9□□□□□ -2.71
CXCL1P09341 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 SNORD101-201ENST00000384027 73 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 MIR34C-201ENST00000384831 77 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 MIR124-2-201ENST00000385081 109 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 RNU6-337P-201ENST00000391243 106 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 AC021443.1-201ENST00000604478 211 ntBASIC-1.91□□□□□ -2.72
CXCL1P09341 RNU6-235P-201ENST00000362644 107 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 RNU6-54P-201ENST00000365563 107 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 RNU6-616P-201ENST00000384353 107 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 AC138393.2-201ENST00000414742 246 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 RNU7-164P-201ENST00000459221 62 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 RNU6-559P-201ENST00000516151 98 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 RNU6-762P-201ENST00000517107 102 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 AC138907.4-201ENST00000570107 226 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 MIR4696-201ENST00000581431 70 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 AC112487.2-201ENST00000637950 304 ntBASIC-1.92□□□□□ -2.72
CXCL1P09341 RNU6-664P-201ENST00000362381 107 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 RNU6-957P-201ENST00000363652 99 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 SNORA63.7-201ENST00000365579 123 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 RNU6-935P-201ENST00000410371 100 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 SNX3P1X-201ENST00000414887 175 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 MTND1P29-201ENST00000448112 647 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 RNU7-123P-201ENST00000515911 60 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.93□□□□□ -2.72
CXCL1P09341 MIR4760-201ENST00000585040 80 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 AC113139.1-201ENST00000605049 239 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 AC002553.4-201ENST00000616896 331 ntBASIC-1.93□□□□□ -2.72
CXCL1P09341 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.94□□□□□ -2.72
CXCL1P09341 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.94□□□□□ -2.72
CXCL1P09341 U3.27-201ENST00000391237 200 ntBASIC-1.94□□□□□ -2.72
CXCL1P09341 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.94□□□□□ -2.72
CXCL1P09341 AC073869.6-201ENST00000640656 341 ntBASIC-1.94□□□□□ -2.72
CXCL1P09341 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.95□□□□□ -2.72
CXCL1P09341 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.95□□□□□ -2.72
CXCL1P09341 RNU6-103P-201ENST00000363686 107 ntBASIC-1.95□□□□□ -2.72
CXCL1P09341 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.95□□□□□ -2.72
CXCL1P09341 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.95□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 205.3 ms