Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 RNU6-1239P-201ENST00000391310 107 ntBASIC0.55□□□□□ -2.32
HOXC4P09017 MIR938-201ENST00000401216 83 ntBASIC0.55□□□□□ -2.32
HOXC4P09017 MIR936-201ENST00000401264 98 ntBASIC0.55□□□□□ -2.32
HOXC4P09017 AC067940.1-201ENST00000458411 300 ntBASIC0.55□□□□□ -2.32
HOXC4P09017 U7.7-201ENST00000459276 60 ntBASIC0.55□□□□□ -2.32
HOXC4P09017 RNU6-1110P-201ENST00000516462 101 ntBASIC0.55□□□□□ -2.32
HOXC4P09017 SNORD92-201ENST00000585078 85 ntBASIC0.55□□□□□ -2.32
HOXC4P09017 Y_RNA.42-201ENST00000362660 108 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 RNU6-363P-201ENST00000362895 105 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 Y_RNA.119-201ENST00000363301 96 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 Y_RNA.247-201ENST00000364500 92 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 U8.6-201ENST00000364939 135 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 Y_RNA.328-201ENST00000365208 113 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 RNU6-1081P-201ENST00000384537 107 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 MIR520H-201ENST00000385126 88 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 RNU7-48P-201ENST00000458875 63 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 MIR4679-2-201ENST00000578358 77 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 MIR6082-201ENST00000613604 109 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.54□□□□□ -2.32
HOXC4P09017 AL162726.3-218ENST00000636401 95 ntBASIC0.54□□□□□ -2.32
HOXC4P09017 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 RNY1P2-201ENST00000364820 117 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 RNU6-1056P-201ENST00000383996 107 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 RNU6-364P-201ENST00000384387 107 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 SNORD20-201ENST00000384550 80 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 SNORD105-201ENST00000386910 85 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 SNORD99-201ENST00000408612 74 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 AC068339.1-201ENST00000526965 141 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 MIR3613-201ENST00000579844 87 ntBASIC0.53□□□□□ -2.32
HOXC4P09017 Y_RNA.85-201ENST00000363014 111 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 Y_RNA.155-201ENST00000363632 101 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 Y_RNA.273-201ENST00000364703 102 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 Y_RNA.281-201ENST00000364774 94 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-1325P-201ENST00000364905 105 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-409P-201ENST00000384114 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-880P-201ENST00000384526 107 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU1-119P-201ENST00000391122 165 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-447P-201ENST00000410293 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-1118P-201ENST00000410382 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-1076P-201ENST00000410397 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-355P-201ENST00000410427 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-791P-201ENST00000410467 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-705P-201ENST00000410601 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-1100P-201ENST00000410691 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-860P-201ENST00000410860 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-1217P-201ENST00000411276 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-785P-201ENST00000411324 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RPL39P34-201ENST00000477141 156 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-589P-201ENST00000516485 107 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-1006P-201ENST00000516998 103 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 DEFB131E-201ENST00000532329 154 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 MIR4711-201ENST00000578274 70 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 MIR4500-201ENST00000579472 76 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 AC090897.1-201ENST00000580909 226 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 AC025627.3-201ENST00000582078 182 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 U6.90-201ENST00000614007 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 U6.70-201ENST00000620287 104 ntBASIC0.52□□□□□ -2.33
HOXC4P09017 RNU6-834P-201ENST00000362367 110 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 Y_RNA.98-201ENST00000363109 102 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 RNA5SP245-201ENST00000364239 121 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 RNU6-865P-201ENST00000364772 107 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 RNU6-1107P-201ENST00000364817 104 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 Y_RNA.360-201ENST00000365512 102 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 MIR577-201ENST00000385196 96 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 SNORA19.1-201ENST00000410656 129 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 Y_RNA.629-201ENST00000411368 105 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.51□□□□□ -2.33
HOXC4P09017 AC244098.3-201ENST00000424803 96 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 BX276092.1-201ENST00000427368 251 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 AC011195.1-201ENST00000578177 177 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 MIR5009-201ENST00000578736 100 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 MIR548AI-201ENST00000579940 88 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.51□□□□□ -2.33
HOXC4P09017 AL512310.12-203ENST00000640543 90 ntBASIC0.51□□□□□ -2.33
HOXC4P09017 RNU6-1313P-201ENST00000362622 102 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 Y_RNA.309-201ENST00000365046 111 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 RNU6-215P-201ENST00000365169 102 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 RNU6-1014P-201ENST00000383940 103 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 Y_RNA.507-201ENST00000384500 99 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 RNU6-291P-201ENST00000384720 107 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 RNY4P18-201ENST00000391107 89 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 RNA5SP193-201ENST00000410353 107 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.5□□□□□ -2.33
HOXC4P09017 Y_RNA.709-201ENST00000516952 92 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 AP001362.1-201ENST00000625165 124 ntBASIC0.5□□□□□ -2.33
HOXC4P09017 Y_RNA.323-201ENST00000365157 109 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 RNY1P8-201ENST00000383970 114 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 RNU6-1201P-201ENST00000384227 107 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 MIR573-201ENST00000384964 99 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 MIR1912-201ENST00000410389 80 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 RNU6-448P-201ENST00000517052 107 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 MIR3612-201ENST00000579753 87 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 uc_338.28-201ENST00000612082 187 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 AL136317.1-201ENST00000612653 226 ntBASIC0.49□□□□□ -2.33
HOXC4P09017 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms